Date: Wed, 17 Jun 2020 23:22:30 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - head-i386-default][science/mdynamix] Failed for mdynamix-5.2.8_4 in build Message-ID: <202006172322.05HNMUa4088809@beefy17.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: gerald@FreeBSD.org Ident: $FreeBSD: head/science/mdynamix/Makefile 507372 2019-07-26 20:46:53Z gerald $ Log URL: http://beefy17.nyi.freebsd.org/data/head-i386-default/p539306_s362212/logs/mdynamix-5.2.8_4.log Build URL: http://beefy17.nyi.freebsd.org/build.html?mastername=head-i386-default&build=p539306_s362212 Log: =>> Building science/mdynamix build started at Wed Jun 17 23:22:06 UTC 2020 port directory: /usr/ports/science/mdynamix package name: mdynamix-5.2.8_4 building for: FreeBSD head-i386-default-job-07 13.0-CURRENT FreeBSD 13.0-CURRENT 1300098 i386 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/mdynamix/Makefile 507372 2019-07-26 20:46:53Z gerald $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300089 Jail OSVERSION: 1300098 Job Id: 07 !!! Jail is newer than host. (Jail: 1300098, Host: 1300089) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1300098 UNAME_v=FreeBSD 13.0-CURRENT 1300098 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/mdynamix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/mdynamix/work HOME=/wrkdirs/usr/ports/science/mdynamix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/mdynamix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/mdynamix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/mdynamix/work HOME=/wrkdirs/usr/ports/science/mdynamix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/mdynamix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPP FLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/mdynamix" EXAMPLESDIR="share/examples/mdynamix" DATADIR="share/mdynamix" WWWDIR="www/mdynamix" ETCDIR="etc/mdynamix" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/mdynamix DOCSDIR=/usr/local/share/doc/mdynamix EXAMPLESDIR=/usr/local/share/examples/mdynamix WWWDIR=/usr/local/www/mdynamix ETCDIR=/usr/local/etc/mdynamix --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-rc1-0-gf79cd71e145) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-rc1-0-gf79cd71e145) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-rc1-0-gf79cd71e145) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300098 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.14.4.txz [head-i386-default-job-07] Installing pkg-1.14.4... [head-i386-default-job-07] Extracting pkg-1.14.4: .......... done ldconfig: aout support is deprecated ===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of mdynamix-5.2.8_4 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by mdynamix-5.2.8_4 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by mdynamix-5.2.8_4 for building => SHA256 Checksum OK for md528.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by mdynamix-5.2.8_4 for building ===> Extracting for mdynamix-5.2.8_4 => SHA256 Checksum OK for md528.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for mdynamix-5.2.8_4 =========================================================================== =======================<phase: build-depends >============================ ===> mdynamix-5.2.8_4 depends on executable: gfortran9 - not found ===> Installing existing package /packages/All/gcc9-9.3.0_1.txz [head-i386-default-job-07] Installing gcc9-9.3.0_1... [head-i386-default-job-07] `-- Installing binutils-2.33.1_2,1... [head-i386-default-job-07] | `-- Installing gettext-runtime-0.20.2... [head-i386-default-job-07] | | `-- Installing indexinfo-0.3.1... <snip> Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o service.o service.f mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif77 -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o pimd.o pimd.f mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:552:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:553:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:558:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement mpif.h:561:11: Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o setup.o setup.f setup.f:965:72: 965 | DO 100 J = 1,NRY | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) setup.f:966:72: 966 | DO 100 K = 1,NRZ | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) mpif77 -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o setup.o setup.f setup.f:965:72: 965 | DO 100 J = 1,NRY | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) setup.f:966:72: 966 | DO 100 K = 1,NRZ | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o util.o util.f util.f:168:72: 168 | DO 20 J=1,N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) util.f:169:72: 169 | 20 A(I,J)=A(I,J)/SCL | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) util.f:171:72: 171 | DO 30 J=1,N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 30 at (1) util.f:177:72: 177 | DO 100 J=1,IU1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) util.f:178:72: 178 | 100 TES=TES+2.D0*A(I,J)*A(I,J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1) util.f:185:72: 185 | DO 165 J=1,IUU1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 165 at (1) util.f:202:72: 202 | IF(K-I)140,135,135 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) util.f:207:72: 207 | 140 IF(K-J)145,150,150 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) util.f:223:72: 223 | IF(M-1)175,170,170 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) util.f:226:72: 226 | 175 IF(TES-RHO)180,180,105 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) util.f:228:72: 228 | DO 190 J=1,N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 190 at (1) util.f:229:72: 229 | 190 A(I,J)=SCL*A(I,J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1) util.f:478:72: 478 | IF(NDIM-6)5,5,2 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) util.f:484:72: 484 | IF(I-NDIM)3,6,6 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) gfortran -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -o md aver.o cpu_intel.o input.o forces.o main.o mdee.o mdstep.o restart.o scalar.o service.o setup.o util.o /usr/local/bin/ld: setup.o: file not recognized: file truncated collect2: error: ld returned 1 exit status make[2]: *** [Makefile.gfortran:10: default] Error 1 make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528' gmake[1]: *** [Makefile:2: default] Error 2 gmake[1]: *** Waiting for unfinished jobs.... mpif77 -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -o mdp aver.o cpu_mpi.o input.o forces.o main.o mdee.o mdstep.o restart.o mpi.o pimd.o service.o setup.o util.o make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528' gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528' ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /usr/ports/science/mdynamix
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