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Date:      Wed, 11 Nov 2020 21:34:56 GMT
From:      pkg-fallout@FreeBSD.org
To:        bofh@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - head-i386-default][biology/seaview] Failed for seaview-5.0.4, 1 in build
Message-ID:  <202011112134.0ABLYuPc081771@beefy17.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     bofh@FreeBSD.org
Last committer: bofh@FreeBSD.org
Ident:          $FreeBSD: head/biology/seaview/Makefile 539893 2020-06-22 17:34:44Z bofh $
Log URL:        http://beefy17.nyi.freebsd.org/data/head-i386-default/p554788_s367522/logs/seaview-5.0.4,1.log
Build URL:      http://beefy17.nyi.freebsd.org/build.html?mastername=head-i386-default&build=p554788_s367522
Log:

=>> Building biology/seaview
build started at Wed Nov 11 21:34:35 UTC 2020
port directory: /usr/ports/biology/seaview
package name: seaview-5.0.4,1
building for: FreeBSD head-i386-default-job-07 13.0-CURRENT FreeBSD 13.0-CURRENT 1300128 i386
maintained by: bofh@FreeBSD.org
Makefile ident:      $FreeBSD: head/biology/seaview/Makefile 539893 2020-06-22 17:34:44Z bofh $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300121
Jail OSVERSION: 1300128
Job Id: 07




!!! Jail is newer than host. (Jail: 1300128, Host: 1300121) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=i386
UNAME_m=i386
OSVERSION=1300128
UNAME_v=FreeBSD 13.0-CURRENT 1300128
UNAME_r=13.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/head-i386-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-i386-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
bofh@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seaview/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seaview/work  HOME=/wrkdirs/usr/ports/biology/seaview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seaview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
HELPFILE='-DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\"'  PHYMLNAME='-DPHYMLNAME=\"phyml\"'  IFLTK='-I/usr/local/include'  LFLTK='-L/usr/local/lib'  USE_XFT='-DUSE_XFT'  OPT="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing " XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seaview/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seaview/work  HOME=/wrkdirs/usr/ports/biology/seaview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seaview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL
 _SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/seaview"  EXAMPLESDIR="share/examples/seaview"  DATADIR="share/seaview"  WWWDIR="www/seaview"  ETCDIR="etc/seaview"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/seaview DOCSDIR=/usr/local/share/doc/seaview EXAMPLESDIR=/usr/local/share/examples/seaview  WWWDIR=/usr/local/www/seaview ETCDIR=/usr/local/etc/seaview
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=i386
OPSYS=FreeBSD
_OSRELEASE=13.0-CURRENT
OSREL=13.0
OSVERSION=1300128
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  524288
stack size              (kbytes, -s)  65536
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   seaview-5.0.4,1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.15.10.txz
[head-i386-default-job-07] Installing pkg-1.15.10...
[head-i386-default-job-07] Extracting pkg-1.15.10: .......... done
===>   seaview-5.0.4,1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of seaview-5.0.4,1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
=> SHA256 Checksum OK for seaview_5.0.4.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
===>  Extracting for seaview-5.0.4,1
=> SHA256 Checksum OK for seaview_5.0.4.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for seaview-5.0.4,1
/usr/bin/sed -i.bak -e  's|^\(CC\) |#\1 | ; s|-ldl || ;  s|^\(CXX\) |#\1 |' /wrkdirs/usr/ports/biology/seaview/work/seaview/Makefile
===========================================================================
=======================<phase: build-depends  >============================
===>   seaview-5.0.4,1 depends on package: gmake>=4.3 - not found
===>   Installing existing package /packages/All/gmake-4.3_2.txz
[head-i386-default-job-07] Installing gmake-4.3_2...
[head-i386-default-job-07] `-- Installing gettext-runtime-0.21...
[head-i386-default-job-07] |   `-- Installing indexinfo-0.3.1...
[head-i386-default-job-07] |   `-- Extracting indexinfo-0.3.1: .... done
<snip>
[head-i386-default-job-07] |   | `-- Extracting libdrm-2.4.103,1: .......... done
[head-i386-default-job-07] |   | `-- Installing libunwind-20200331_1...
[head-i386-default-job-07] |   | `-- Extracting libunwind-20200331_1: .......... done
[head-i386-default-job-07] |   | `-- Installing libxshmfence-1.3...
[head-i386-default-job-07] |   | `-- Extracting libxshmfence-1.3: ......... done
[head-i386-default-job-07] |   | `-- Installing wayland-1.18.0_4...
[head-i386-default-job-07] |   |   `-- Installing libepoll-shim-0.0.20200602...
[head-i386-default-job-07] |   |   `-- Extracting libepoll-shim-0.0.20200602: .......... done
[head-i386-default-job-07] |   |   `-- Installing libffi-3.3_1...
[head-i386-default-job-07] |   |   `-- Extracting libffi-3.3_1: .......... done
[head-i386-default-job-07] |   | `-- Extracting wayland-1.18.0_4: .......... done
[head-i386-default-job-07] |   | `-- Installing zstd-1.4.5_1...
[head-i386-default-job-07] |   |   `-- Installing liblz4-1.9.2_1,1...
[head-i386-default-job-07] |   |   `-- Extracting liblz4-1.9.2_1,1: .......... done
[head-i386-default-job-07] |   | `-- Extracting zstd-1.4.5_1: .......... done
[head-i386-default-job-07] |   `-- Extracting mesa-libs-20.2.0_1: .......... done
[head-i386-default-job-07] `-- Extracting libGLU-9.0.1: ...... done
[head-i386-default-job-07] Extracting fltk-1.3.5: .......... done
===>   seaview-5.0.4,1 depends on shared library: libfltk.so - found (/usr/local/lib/libfltk.so)
===>   Returning to build of seaview-5.0.4,1
===>   seaview-5.0.4,1 depends on shared library: libfontconfig.so - found (/usr/local/lib/libfontconfig.so)
===>   seaview-5.0.4,1 depends on shared library: libpng.so - found (/usr/local/lib/libpng.so)
===>   seaview-5.0.4,1 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for seaview-5.0.4,1
===========================================================================
=======================<phase: build          >============================
===>  Building for seaview-5.0.4,1
gmake[1]: Entering directory '/wrkdirs/usr/ports/biology/seaview/work/seaview'
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF seaview.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF custom.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF use_mase_files.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF regions.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF load_seq.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF align.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF xfmatpt.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF comlines.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF resource.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF nexus.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF viewasprots.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF racnuc_fetch.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF concatenate.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF statistics.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF trees.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treedraw.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF addbootstrap.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF least_squares_brl.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pseudoterminal.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF unrooted.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pdf_or_ps.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF svg.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF threads.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF tbe.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treerecs_draw.cxx
c++ -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF FL/Fl_SVG_Image.cxx
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/raa_acnuc.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/parser.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/md5.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/zsockr.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/misc_acnuc.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/dnapars.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/protpars.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/seq.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/phylip.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/lwl.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/bionj.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/phyml_util.c
c++ -o seaview   -fstack-protector-strong  seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o treerecs_draw.o Fl_SVG_Image.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o  `fltk-config --use-images --ldflags` -lpthread -lz 
ld: error: duplicate symbol: progname
>>> defined at seaview.cxx
>>>            seaview.o:(progname)
>>> defined at dnapars.c
>>>            dnapars.o:(.bss+0xE0)

ld: error: duplicate symbol: ancseq
>>> defined at dnapars.c
>>>            dnapars.o:(ancseq)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x5EE)

ld: error: duplicate symbol: bestrees
>>> defined at dnapars.c
>>>            dnapars.o:(bestrees)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x61C)

ld: error: duplicate symbol: chars
>>> defined at dnapars.c
>>>            dnapars.o:(chars)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x260)

ld: error: duplicate symbol: col
>>> defined at dnapars.c
>>>            dnapars.o:(col)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x5DC)

ld: error: duplicate symbol: enterorder
>>> defined at dnapars.c
>>>            dnapars.o:(enterorder)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x614)

ld: error: duplicate symbol: firstplotblock
>>> defined at dnapars.c
>>>            dnapars.o:(firstplotblock)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x2B9)

ld: error: duplicate symbol: firstset
>>> defined at dnapars.c
>>>            dnapars.o:(firstset)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x28C)

ld: error: duplicate symbol: fsteps
>>> defined at dnapars.c
>>>            dnapars.o:(fsteps)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x618)

ld: error: duplicate symbol: garbage
>>> defined at dnapars.c
>>>            dnapars.o:(garbage)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x280)

ld: error: duplicate symbol: infilename
>>> defined at dnapars.c
>>>            dnapars.o:(infilename)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x2BA)

ld: error: duplicate symbol: inseed
>>> defined at dnapars.c
>>>            dnapars.o:(inseed)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x5E0)

ld: error: duplicate symbol: inseed0
>>> defined at dnapars.c
>>>            dnapars.o:(inseed0)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x5E4)

ld: error: duplicate symbol: intreename
>>> defined at dnapars.c
>>>            dnapars.o:(intreename)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x44A)

ld: error: duplicate symbol: ith
>>> defined at dnapars.c
>>>            dnapars.o:(ith)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x29C)

ld: error: duplicate symbol: javarun
>>> defined at dnapars.c
>>>            dnapars.o:(javarun)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x2B8)

ld: error: duplicate symbol: jumb
>>> defined at dnapars.c
>>>            dnapars.o:(jumb)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x2A0)

ld: error: duplicate symbol: jumble
>>> defined at dnapars.c
>>>            dnapars.o:(jumble)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x294)

ld: error: duplicate symbol: justwts
>>> defined at dnapars.c
>>>            dnapars.o:(justwts)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x5ED)

ld: error: duplicate symbol: lastrearr
>>> defined at dnapars.c
>>>            dnapars.o:(lastrearr)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x634)

ld: error: too many errors emitted, stopping now (use -error-limit=0 to see all errors)
c++: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[1]: *** [Makefile:46: seaview] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/seaview/work/seaview'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/seaview



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