From owner-svn-ports-all@freebsd.org Mon Jun 15 08:26:23 2020 Return-Path: Delivered-To: svn-ports-all@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 8D25E32C287; Mon, 15 Jun 2020 08:26:23 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 49lkv32y8Fz4HVL; Mon, 15 Jun 2020 08:26:23 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 60A2B1AD09; Mon, 15 Jun 2020 08:26:23 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 05F8QNOH069171; Mon, 15 Jun 2020 08:26:23 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 05F8QMNx069169; Mon, 15 Jun 2020 08:26:22 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <202006150826.05F8QMNx069169@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Mon, 15 Jun 2020 08:26:22 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r538862 - head/science/agrum X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: head/science/agrum X-SVN-Commit-Revision: 538862 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.33 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 15 Jun 2020 08:26:23 -0000 Author: yuri Date: Mon Jun 15 08:26:22 2020 New Revision: 538862 URL: https://svnweb.freebsd.org/changeset/ports/538862 Log: science/agrum: Update 0.17.3 -> 0.18.0 Modified: head/science/agrum/Makefile head/science/agrum/distinfo head/science/agrum/pkg-plist Modified: head/science/agrum/Makefile ============================================================================== --- head/science/agrum/Makefile Mon Jun 15 08:12:18 2020 (r538861) +++ head/science/agrum/Makefile Mon Jun 15 08:26:22 2020 (r538862) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= agrum -DISTVERSION= 0.17.3 +DISTVERSION= 0.18.0 CATEGORIES= science math MAINTAINER= yuri@FreeBSD.org @@ -17,7 +17,7 @@ LLD_UNSAFE= yes GL_ACCOUNT= agrumery GL_PROJECT= aGrUM -GL_COMMIT= 5cfa32ca256250fe7deef11b7fd0c8da68ffa66d +GL_COMMIT= 526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f CMAKE_OFF= USE_SWIG Modified: head/science/agrum/distinfo ============================================================================== --- head/science/agrum/distinfo Mon Jun 15 08:12:18 2020 (r538861) +++ head/science/agrum/distinfo Mon Jun 15 08:26:22 2020 (r538862) @@ -1,3 +1,3 @@ -TIMESTAMP = 1590458583 -SHA256 (agrumery-aGrUM-5cfa32ca256250fe7deef11b7fd0c8da68ffa66d_GL0.tar.gz) = 6e44fb1518a923d7a44a5b8f64f122df8d3d3332ad10aea6d102fdcddf183ceb -SIZE (agrumery-aGrUM-5cfa32ca256250fe7deef11b7fd0c8da68ffa66d_GL0.tar.gz) = 14515975 +TIMESTAMP = 1592207534 +SHA256 (agrumery-aGrUM-526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f_GL0.tar.gz) = 9731d813d04f626958078258021cc1a2ed3fc8743336b459c27989937503ede8 +SIZE (agrumery-aGrUM-526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f_GL0.tar.gz) = 15277054 Modified: head/science/agrum/pkg-plist ============================================================================== --- head/science/agrum/pkg-plist Mon Jun 15 08:12:18 2020 (r538861) +++ head/science/agrum/pkg-plist Mon Jun 15 08:26:22 2020 (r538862) @@ -64,6 +64,8 @@ include/agrum/BN/inference/loopySamplingInference.h include/agrum/BN/inference/loopySamplingInference_tpl.h include/agrum/BN/inference/tools/BayesNetInference.h include/agrum/BN/inference/tools/BayesNetInference_tpl.h +include/agrum/BN/inference/tools/aggregatorDecomposition.h +include/agrum/BN/inference/tools/aggregatorDecomposition_tpl.h include/agrum/BN/inference/tools/approximateInference.h include/agrum/BN/inference/tools/estimator.h include/agrum/BN/inference/tools/estimator_tpl.h @@ -102,10 +104,10 @@ include/agrum/BN/io/DSL/DSLWriter.h include/agrum/BN/io/DSL/DSLWriter_tpl.h include/agrum/BN/io/DSL/cocoR/Parser.h include/agrum/BN/io/DSL/cocoR/Scanner.h -include/agrum/BN/io/UAI/UAIReader.h -include/agrum/BN/io/UAI/UAIReader_tpl.h -include/agrum/BN/io/UAI/UAIWriter.h -include/agrum/BN/io/UAI/UAIWriter_tpl.h +include/agrum/BN/io/UAI/UAIBNReader.h +include/agrum/BN/io/UAI/UAIBNReader_tpl.h +include/agrum/BN/io/UAI/UAIBNWriter.h +include/agrum/BN/io/UAI/UAIBNWriter_tpl.h include/agrum/BN/io/UAI/cocoR/Parser.h include/agrum/BN/io/UAI/cocoR/Scanner.h include/agrum/BN/io/cnf/CNFWriter.h @@ -321,6 +323,26 @@ include/agrum/MN/IMarkovNet.h include/agrum/MN/IMarkovNet_tpl.h include/agrum/MN/MarkovNet.h include/agrum/MN/MarkovNet_tpl.h +include/agrum/MN/inference/ShaferShenoyMNInference.h +include/agrum/MN/inference/ShaferShenoyMNInference_tpl.h +include/agrum/MN/inference/tools/MarkovNetInference.h +include/agrum/MN/inference/tools/MarkovNetInference_tpl.h +include/agrum/MN/inference/tools/evidenceMNInference.h +include/agrum/MN/inference/tools/evidenceMNInference_tpl.h +include/agrum/MN/inference/tools/jointTargetedMNInference.h +include/agrum/MN/inference/tools/jointTargetedMNInference_tpl.h +include/agrum/MN/inference/tools/marginalTargetedMNInference.h +include/agrum/MN/inference/tools/marginalTargetedMNInference_tpl.h +include/agrum/MN/io/MNReader.h +include/agrum/MN/io/MNReader_tpl.h +include/agrum/MN/io/MNWriter.h +include/agrum/MN/io/MNWriter_tpl.h +include/agrum/MN/io/UAI/UAIMNReader.h +include/agrum/MN/io/UAI/UAIMNReader_tpl.h +include/agrum/MN/io/UAI/UAIMNWriter.h +include/agrum/MN/io/UAI/UAIMNWriter_tpl.h +include/agrum/MN/io/UAI/cocoR/Parser.h +include/agrum/MN/io/UAI/cocoR/Scanner.h include/agrum/PRM/IPRMFactory.h include/agrum/PRM/PRM.h include/agrum/PRM/PRMFactory.h @@ -713,6 +735,8 @@ include/agrum/tools/multidim/aggregators/multiDimAggre include/agrum/tools/multidim/aggregators/multiDimAggregator_tpl.h include/agrum/tools/multidim/aggregators/or.h include/agrum/tools/multidim/aggregators/or_tpl.h +include/agrum/tools/multidim/aggregators/sum.h +include/agrum/tools/multidim/aggregators/sum_tpl.h include/agrum/tools/multidim/implementations/multiDimAdressable.h include/agrum/tools/multidim/implementations/multiDimAdressable_inl.h include/agrum/tools/multidim/implementations/multiDimArray.h @@ -849,7 +873,7 @@ lib/cmake/aGrUM/agrum-targets-%%CMAKE_BUILD_TYPE%%.cma lib/cmake/aGrUM/agrum-targets.cmake lib/libagrum.so lib/libagrum.so.0 -lib/libagrum.so.0.17.3 +lib/libagrum.so.0.18.0 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%-py%%PYTHON_VER_MAJ%%.egg-info %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%.dist-info/METADATA %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%.dist-info/WHEEL @@ -869,7 +893,6 @@ lib/libagrum.so.0.17.3 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/config.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/defaults.ini %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/deprecated.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/functions.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/__init__.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/_utils/__init__.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/_utils/oslike.py @@ -883,7 +906,9 @@ lib/libagrum.so.0.17.3 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/classifier.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/dynamicBN.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/ipython.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/mn2graph.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/notebook.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/pretty_print.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/proba_histogram.py %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/pyAgrum.py libdata/pkgconfig/agrum.pc