Date: 26 May 2003 18:17:29 -0700 From: Joe Kelsey <joe@zircon.seattle.wa.us> To: stable@freebsd.org Subject: portupgrade issue Message-ID: <1053998248.14371.79.camel@zircon>
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I am running 4.8-STABLE. I recently did a cvsup (repeatedly, most recently today). Ever since, portupgrade dies with the following messages: zircon# portupgrade -r pkgconfig /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:310:in `deorigin': failed to convert nil into String (PkgDB::DBError) from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:903:in `tsort_build' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:902:in `each' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:902:in `tsort_build' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:894:in `each' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:894:in `tsort_build' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:916:in `sort_build' from /usr/local/lib/ruby/site_ruby/1.6/pkgdb.rb:920:in `sort_build!' from /usr/local/sbin/portupgrade:674:in `main' from /usr/local/sbin/portupgrade:207:in `initialize' from /usr/local/sbin/portupgrade:207:in `new' from /usr/local/sbin/portupgrade:207:in `main' from /usr/local/sbin/portupgrade:1846 I have removed INDEX and INDEX.db, run make INDEX, run portsdb -Uu more times than I cancount, yet nothing works. Last time I ran portsdb -Uu, this is wat it produced: zircon# portsdb -Uu Updating the ports index ... zh-bg5pdf-1.0.0:"/usr/ports/print/pdflib3" non-existent -- dependency list incomplete "Makefile", line 17: Could not find /usr/ports/chinese/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed entry: "Makefile", line 17: Could not find /usr/ports/chinese/kde2-i18n/../../misc/kde2-i18n/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 zh-libtabe-0.2.2:"/usr/ports/databases/db" non-existent -- dependency list incomplete zh_TW-netscape-communicator-linux-4.77:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete zh_TW-netscape-navigator-linux-4.77:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete zh_TW-netscape-navigator-4.76:"/usr/ports/www/libxpg4-ns" non-existent -- dependency list incomplete zh_TW-netscape-communicator-4.76:"/usr/ports/www/libxpg4-ns" non-existent -- dependency list incomplete zh-xcin-2.5.2.3_1:"/usr/ports/databases/db" non-existent -- dependency list incomplete "Makefile", line 21: Could not find /usr/ports/chinese/xmms/../../audio/xmms/Makefile: malformed entry: "Makefile", line 21: Could not find /usr/ports/chinese/xmms/../../audio/xmms/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 `all' not remade because of errors.: malformed entry: `all' not remade because of errors. "Makefile", line 17: Could not find /usr/ports/french/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed entry: "Makefile", line 17: Could not find /usr/ports/french/kde2-i18n/../../misc/kde2-i18n/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 fr-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent -- dependency list incomplete fr-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW" non-existent -- dependency list incomplete `all' not remade because of errors.: malformed entry: `all' not remade because of errors. "Makefile", line 17: Could not find /usr/ports/german/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed entry: "Makefile", line 17: Could not find /usr/ports/german/kde2-i18n/../../misc/kde2-i18n/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 de-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent -- dependency list incomplete de-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW" non-existent -- dependency list incomplete `all' not remade because of errors.: malformed entry: `all' not remade because of errors. ja-ghostscript-gnu-cjk-6.52:"/usr/ports/print/ghostscript-gnu-cjk" non-existent -- dependency list incomplete "Makefile", line 15: Could not find /usr/ports/japanese/gp/../../print/gp/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/gp/../../print/gp/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 17: Could not find /usr/ports/japanese/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed entry: "Makefile", line 17: Could not find /usr/ports/japanese/kde2-i18n/../../misc/kde2-i18n/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 23: Could not find /usr/ports/japanese/kdeaddons/../../misc/kdeaddons/Makefile: malformed entry: "Makefile", line 23: Could not find /usr/ports/japanese/kdeaddons/../../misc/kdeaddons/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 22: Could not find /usr/ports/japanese/kdebase2/../../x11/kdebase2/Makefile: malformed entry: "Makefile", line 22: Could not find /usr/ports/japanese/kdebase2/../../x11/kdebase2/Makefile "Makefile", line 22: Could not find /usr/ports/japanese/kdelibs2/../../x11/kdelibs2/Makefile: malformed entry: "Makefile", line 22: Could not find /usr/ports/japanese/kdelibs2/../../x11/kdelibs2/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 25: Could not find /usr/ports/japanese/kdenetwork2/../../net/kdenetwork2/Makefile: malformed entry: "Makefile", line 25: Could not find /usr/ports/japanese/kdenetwork2/../../net/kdenetwork2/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 ja-koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent -- dependency list incomplete ja-koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW" non-existent -- dependency list incomplete ja-netscape-communicator-linux-4.79:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete ja-netscape-navigator-linux-4.79:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete ja-lookup-xemacs21-mule-1.3:"/usr/ports/editors/xemacs-games-packages" non-existent -- dependency list incomplete ja-lookup-xemacs21-mule-1.3:"/usr/ports/editors/xemacs-games-packages" non-existent -- dependency list incomplete ja-mypaedia-fpw-package-1.0.6:"/usr/ports/graphics/xanim" non-existent -- dependency list incomplete ja-netscape-3.04:"/usr/ports/www/netscape3" non-existent -- dependency list incomplete ja-netscape-communicator-4.08:"/usr/ports/www/netscape4-communicator" non-existent -- dependency list incomplete ja-netscape-navigator-4.08:"/usr/ports/www/netscape4-navigator" non-existent -- dependency list incomplete ja-netypesv-0.1.0:"/usr/ports/java/jdk12-beta" non-existent -- dependency list incomplete ja-rbnamazu-0.4:"/usr/ports/devel/ruby-optparse" non-existent -- dependency list incomplete "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna/../../editors/xemacs21-sumo/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+freewnn/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+freewnn/../../editors/xemacs21-sumo/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+wnn6/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-canna+wnn6/../../editors/xemacs21-sumo/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-wnn6/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-wnn6/../../editors/xemacs21-sumo/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-freewnn/../../editors/xemacs21-sumo/Makefile: malformed entry: "Makefile", line 15: Could not find /usr/ports/japanese/xemacs21-sumo-freewnn/../../editors/xemacs21-sumo/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 `all' not remade because of errors.: malformed entry: `all' not remade because of errors. ko-ghostscript-gnu-cjk-6.52:"/usr/ports/print/ghostscript-gnu-cjk" non-existent -- dependency list incomplete "Makefile", line 17: Could not find /usr/ports/korean/kde2-i18n/../../misc/kde2-i18n/Makefile: malformed entry: "Makefile", line 17: Could not find /usr/ports/korean/kde2-i18n/../../misc/kde2-i18n/Makefile make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 ko-netscape-communicator-linux-4.79:"/usr/ports/www/linux-netscape47-communicator" non-existent -- dependency list incomplete ko-netscape-navigator-linux-4.79:"/usr/ports/www/linux-netscape47-navigator" non-existent -- dependency list incomplete ko-netscape-3.04:"/usr/ports/www/netscape3" non-existent -- dependency list incomplete ko-netscape-communicator-4.08:"/usr/ports/www/netscape4-communicator" non-existent -- dependency list incomplete ko-netscape-navigator-4.08:"/usr/ports/www/netscape4-navigator" non-existent -- dependency list incomplete `all' not remade because of errors.: malformed entry: `all' not remade because of errors. pmail-0.5.3_2:"" non-existent -- dependency list incomplete pmail-0.5.3_2:"/usr/ports/devel/pop3lite-0.2.4a" non-existent -- dependency list incomplete libglade gal.23:/usr/ports/x11-toolkits/gal glibwww.1:/usr/ports/www/glibwww gtkhtml-1.1.3:/usr/ports/www/gtkhtml panel_applet.5:/usr/ports/x11/libpanel: malformed entry: libglade gal.23:/usr/ports/x11-toolkits/gal glibwww.1:/usr/ports/www/glibwww gtkhtml-1.1.3:/usr/ports/www/gtkhtml panel_applet.5:/usr/ports/x11/libpanel|/usr/local/lib/python2.2/site-packages/gtk-1.2/_gnomemodule.so:/usr/ports/x11-toolkits/py-gnome /usr/local/bin/python2.2:/usr/ports/lang/python /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier | "/usr/ports/mail/sendmail-ldap/../sendmail/Makefile", line 196: Could not find /usr/ports/security/openssl/Makefile.ssl: malformed entry: "/usr/ports/mail/sendmail-ldap/../sendmail/Makefile", line 196: Could not find /usr/ports/security/openssl/Makefile.ssl make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 "/usr/ports/mail/sendmail-sasl/../sendmail/Makefile", line 196: Could not find /usr/ports/security/openssl/Makefile.ssl: malformed entry: "/usr/ports/mail/sendmail-sasl/../sendmail/Makefile", line 196: Could not find /usr/ports/security/openssl/Makefile.ssl make: fatal errors encountered -- cannot continue: malformed entry: make: fatal errors encountered -- cannot continue *** Error code 1: malformed entry: *** Error code 1 `all' not remade because of errors.: malformed entry: `all' not remade because of errors. kde-i18n-3.1.2:"/usr/ports/japanese/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/french/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/german/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/hebrew/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/korean/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/russian/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/vietnamese/kde3-i18n" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/chinese/kde3-i18n-zh_CN" non-existent -- dependency list incomplete kde-i18n-3.1.2:"/usr/ports/chinese/kde3-i18n-zh_TW" non-existent -- dependency list incomplete koffice-i18n-1.2.1:"/usr/ports/hebrew/koffice-i18n" non-existent -- dependency list incomplete koffice-i18n-1.2.1:"/usr/ports/chinese/koffice-i18n-zh_TW" non-existent -- dependency list incomplete gfontview-0.5.0_2:"" non-existent -- dependency list incomplete gfontview-0.5.0_2:"/usr/ports/www/gtkhtmggv-1.0.2_2" non-existent -- dependency list incomplete l panel_applet.5:/usr/ports/x11/libpanel: malformed entry: l panel_applet.5:/usr/ports/x11/libpanel| /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier | ru-koffice-i18n-1.1.1:"/usr/ports/editors/koffice" non-existent -- dependency list incomplete galeon2-1.3.4:"" non-existent -- dependency list incomplete galeon2-1.3.4:"/usrgallery-1.3.3" non-existent -- dependency list incomplete /ports/devel/libbonobo gconf-2.5:/usr/ports/devel/gconf2 gnomevfs-2.0:/usr/ports/devel/gnomevfs2 gnomecanvas-2.200:/usr/ports/graphics/libgnomecanvas art_lgpl_2.5:/usr/ports/graphics/libart_lgpl2 gnome-2.200:/usr/ports/x11/libgnome bonoboui-2.0:/usr/ports/x11-toolkits/libbonoboui gnomeui-2.200:/usr/ports/x11-toolkits/libgnomeui: malformed entry: /ports/devel/libbonobo gconf-2.5:/usr/ports/devel/gconf2 gnomevfs-2.0:/usr/ports/devel/gnomevfs2 gnomecanvas-2.200:/usr/ports/graphics/libgnomecanvas art_lgpl_2.5:/usr/ports/graphics/libart_lgpl2 gnome-2.200:/usr/ports/x11/libgnome bonoboui-2.0:/usr/ports/x11-toolkits/libbonoboui gnomeui-2.200:/usr/ports/x11-toolkits/libgnomeui|/usr/X11R6/lib/mozilla-gtk2/components/libwidget_gtk2.so:/usr/ports/www/mozilla-gtk2 /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier /usr/X11R6/libdata/pkgconfig/gnome-mime-data-2.0.pc:/usr/ports/misc/gnomemimedata | nautilus-1.0.6_9:"" non-existent -- dependency list incomplete nautilus-1.0.6_9:"/usr/portsoffix-files-2.4" non-existent -- dependency list incomplete /print/gnomeprint bonobo.2:/usr/ports/devel/bonobo panel_applet.5:/usr/ports/x11/libpanel: malformed entry: /print/gnomeprint bonobo.2:/usr/ports/devel/bonobo panel_applet.5:/usr/ports/x11/libpanel| /usr/X11R6/share/gnome/.keep_me:/usr/ports/misc/gnomehier /usr/X11R6/libdata/pkgconfig/gnome-mime-data-2.0.pc:/usr/ports/misc/gnomemimedata | make_index: ja-netscape-communicator-4.76: no entry for /usr/ports/www/netscape47-communicator make_index: zh_TW-netscape-navigator-4.76: no entry for /usr/ports/www/netscape47-navigator make_index: ko-netscape-navigator-4.76: no entry for /usr/ports/www/netscape47-navigator make_index: ja-netscape-navigator-4.76: no entry for /usr/ports/www/netscape47-navigator make_index: pmail-0.5.3_2: no entry for /usr/local make_index: pmail-0.5.3_2: no entry for /usr/local make_index: gfontview-0.5.0_2: no entry for /usr/X11R6 make_index: gfontview-0.5.0_2: no entry for /usr/X11R6 make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdebase2 make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdelibs2 make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kde2-i18n make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdeaddons make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdebase2 make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdelibs2 make_index: ja-kde-2.2.2_1: no entry for /usr/ports/japanese/kdenetwork2 make_index: ru-netscape-4.7: no entry for /usr/ports/www/netscape47-communicatormake_index: gnome-1.4.1b2_2: no entry for /usr/ports/print/ggv make_index: ko-netscape-communicator-4.76: no entry for /usr/ports/www/netscape47-communicator make_index: galeon2-1.3.4: no entry for /usr/local make_index: galeon2-1.3.4: no entry for /usr/local make_index: zh_TW-netscape-communicator-4.76: no entry for /usr/ports/www/netscape47-communicator make_index: nautilus-1.0.6_9: no entry for /usr/X11R6 make_index: nautilus-1.0.6_9: no entry for /usr/X11R6 Out of memory! Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. Attempt to free unreferenced scalar at Tools/make_index line 44, <> chunk 8624. done [Updating the portsdb <format:bdb1_btree> in /usr/ports ... - 2338 port entries found .........1000.........2000.../usr/ports/INDEX:2338:Port info line must consist of 10 fields. ..... done] If anyone has any suggestions, I would appreciate the help. /Joe
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