Date: Sun, 26 Jan 2020 14:02:54 +0100 From: Xavier <xavier@groumpf.org> To: freebsd-ports@freebsd.org Cc: phd_kimberlite@yahoo.co.jp, fortran@FreeBSD.org, starikarp@dismail.de Subject: Re: py-scipy (and others) with openblas Message-ID: <8b38bfce-7c03-4508-a605-aef136616679@groumpf.org> In-Reply-To: <20200125103852.50289133@dismail.de> References: <7cfb6af1-ec68-2bdc-0ed5-0405cd7fae78@groumpf.org> <20200125103852.50289133@dismail.de>
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This is an OpenPGP/MIME signed message (RFC 4880 and 3156) --wniglJVlmIilZFdiwGeocDJ4r8GwWUEkJ Content-Type: multipart/mixed; boundary="JaxfxTNEN4sSSFRvOW8KpouVt76lcWSUR" --JaxfxTNEN4sSSFRvOW8KpouVt76lcWSUR Content-Type: text/plain; charset=utf-8 Content-Language: en-US Content-Transfer-Encoding: quoted-printable On 25/01/2020 16:38, starikarp@dismail.de wrote: > On Sat, 25 Jan 2020 14:07:57 +0100 > Xavier <xavier@groumpf.org> wrote: >=20 >> Hi, >> I looked at the posts from 22/01 about cblas/openblas, and ran in the >> very same problem. So I delete cblas, and let openblas running an >> upgrade. But pkg check -Bd show e an error, which is not fixed by >> rebuilding py37-numpy (twice): >> >>> py37-scipy is missing a required shared library: libopenblas.so >> >> The library exists : >>> lrwxr-xr-x 1 root wheel 16 Jan 25 11:59 >>> /usr/local/lib/libopenblas.so@ -> libopenblas.so.0 -rwxr-xr-x 1 >>> root wheel 31038608 Jan 25 11:59 /usr/local/lib/libopenblas.so.0* >> >> What can I do now ? >> >> TIA, >> >> Cheers, >> >> Xavier >> >=20 > I have same old work with py37-scipy and everything works... > I try the example from now and it works. > Please, check the attached jpg. >=20 Yes, indeed it works, because it is not a dependency problem, but a problem in pkg database, I verified it with a port exhibiting the problem, for which I'm sure there's shared libs : > [root@numenor ~]# pkg check -Bd suitesparse > Checking suitesparse: 100% > suitesparse is missing a required shared library: libopenblas.so But, when checking manually : > [root@numenor ~]# pkg list suitesparse |grep \.so$ |xargs ldd|grep open= blas > libopenblas.so =3D> /usr/local/lib/libopenblas.so (0x801c00000)= > libopenblas.so =3D> /usr/local/lib/libopenblas.so (0x801a00000)= > libopenblas.so =3D> /usr/local/lib/libopenblas.so (0x801600000)= In conclusion, I can safely ignore those errors I dunno whether the problem is in the packaging of the concerned port, or openblas. So, I Cc the maintainers Regards, Xavier --=20 Xavier Humbert - sysadmin & network engineer --JaxfxTNEN4sSSFRvOW8KpouVt76lcWSUR-- --wniglJVlmIilZFdiwGeocDJ4r8GwWUEkJ Content-Type: application/pgp-signature; name="signature.asc" Content-Description: OpenPGP digital signature Content-Disposition: attachment; filename="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEESAZA8WgF/u/6AMGYgbW6+oca/hUFAl4tjgIACgkQgbW6+oca /hUf8A//S2jd+kcO38cvjGmpGIMNyJHu0OvHjIdJ8GGNJzq3jVt/6UVpRiCXKlVV vfHOAxaJVKJN5ErnGeEY7MdMM6IpdXQy0GZ40N/jfG2eEpQBIfJrECkugQEouLRF /fsqEgNE4za0aBqifPwaMMaaRxJO5v1PSae8zknXMpmF2jOtrByCENeL10oP7mJp h6VK2xtZzOoXQ+c+xGepxkKpZm877ZRr2v12YBP5JFncUP/Vn5FOFQUiIqswPMiy 9S53gse2vBNLUVeo4Xnz9G1r0/a8bDASmyCwsMWJ5eyzTq+JA8qGY35ka4yI3lvj +90uhZm+ZxDMS4QPlmyfLPG/pAvrs2nOqWSi+xTyUfA4Udp/4ehWk3mrOw5uLlvJ j6zBZLdseHk+Iiw2fhFJu8ZIqru9v4bHj+oTvzQg7Pe5Q/qIUBCWYBmjNo8/lALX QuvgcIq4YGLi/FIxzDeBMpRCIRirwai9yAoZR4AQwNRdcPuFF0PPdBSuWFdxx4oa 3VF+ek7mEN97qjd2nLOkZ4PY6NMsRo4cyDEklHN89dYv/U1tis2ocbA2bAeVy0TK nhcrHVuuEt2evH0lPkUhzrsRR3VFahKdQ4q5J1pIt//q4EdOLw20k4ErNr0qMyWy pglX2dNmktLR4YRV67VBEIg5MNIeRnCgtYXQzsh89W4cdLU+O7k= =lDsm -----END PGP SIGNATURE----- --wniglJVlmIilZFdiwGeocDJ4r8GwWUEkJ--
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