Date: Mon, 2 Jun 2025 19:01:46 GMT From: Rene Ladan <rene@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 8e5f53e29c3c - main - science/py-DendroPy: Remove expired port Message-ID: <202506021901.552J1kpR053436@gitrepo.freebsd.org>
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The branch main has been updated by rene: URL: https://cgit.FreeBSD.org/ports/commit/?id=8e5f53e29c3ccf869c4c44506c4c35aa824d9a21 commit 8e5f53e29c3ccf869c4c44506c4c35aa824d9a21 Author: Rene Ladan <rene@FreeBSD.org> AuthorDate: 2025-06-02 19:01:40 +0000 Commit: Rene Ladan <rene@FreeBSD.org> CommitDate: 2025-06-02 19:01:40 +0000 science/py-DendroPy: Remove expired port 2025-03-31 science/py-DendroPy: Depends on expired devel/py-pytest-runner --- MOVED | 1 + science/Makefile | 1 - science/py-DendroPy/Makefile | 24 ------------------------ science/py-DendroPy/distinfo | 3 --- science/py-DendroPy/pkg-descr | 2 -- science/py-DendroPy/pkg-message | 11 ----------- 6 files changed, 1 insertion(+), 41 deletions(-) diff --git a/MOVED b/MOVED index ff6d0dab6e53..7cef68174a79 100644 --- a/MOVED +++ b/MOVED @@ -4492,3 +4492,4 @@ textproc/py-colorclass||2025-06-02|Has expired: Upstream repository has been arc security/py-oauth2client||2025-06-02|Has expired: Deprecated by upstream. Use security/py-google-auth or security/py-oauthlib instead. See https://google-auth.readthedocs.io/en/latest/oauth2client-deprecation.html for details math/py-grandalf||2025-06-02|Has expired: Depends on expired devel/py-pytest-runner multimedia/py-ffmpeg-python||2025-06-02|Has expired: Depends on expired devel/py-pytest-runner +science/py-DendroPy||2025-06-02|Has expired: Depends on expired devel/py-pytest-runner diff --git a/science/Makefile b/science/Makefile index fa2e9d6f9404..5f8620db1e5d 100644 --- a/science/Makefile +++ b/science/Makefile @@ -277,7 +277,6 @@ SUBDIR += precice SUBDIR += psi4 SUBDIR += pulseview - SUBDIR += py-DendroPy SUBDIR += py-GPy SUBDIR += py-GPyOpt SUBDIR += py-HepMC3 diff --git a/science/py-DendroPy/Makefile b/science/py-DendroPy/Makefile deleted file mode 100644 index c92414b1f2d8..000000000000 --- a/science/py-DendroPy/Makefile +++ /dev/null @@ -1,24 +0,0 @@ -PORTNAME= DendroPy -PORTVERSION= 5.0.1 -PORTREVISION= 1 -CATEGORIES= science python -MASTER_SITES= PYPI -PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} - -MAINTAINER= wen@FreeBSD.org -COMMENT= Phylogenetic computing library -WWW= http://packages.python.org/DendroPy/ - -LICENSE= BSD3CLAUSE - -DEPRECATED= Depends on expired devel/py-pytest-runner -EXPIRATION_DATE=2025-03-31 - -BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pip>0:devel/py-pip@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pytest-runner>0:devel/py-pytest-runner@${PY_FLAVOR} - -USES= python -USE_PYTHON= distutils autoplist - -.include <bsd.port.mk> diff --git a/science/py-DendroPy/distinfo b/science/py-DendroPy/distinfo deleted file mode 100644 index 0db0c8397580..000000000000 --- a/science/py-DendroPy/distinfo +++ /dev/null @@ -1,3 +0,0 @@ -TIMESTAMP = 1717397726 -SHA256 (DendroPy-5.0.1.tar.gz) = f2815e7649a6fe2924ff3fdf00a660c948dc6f3316e303b8b022f74cc75ca42e -SIZE (DendroPy-5.0.1.tar.gz) = 395057 diff --git a/science/py-DendroPy/pkg-descr b/science/py-DendroPy/pkg-descr deleted file mode 100644 index 7a507db67459..000000000000 --- a/science/py-DendroPy/pkg-descr +++ /dev/null @@ -1,2 +0,0 @@ -py-DendroPy is a python library for phylogenetic scripting, -simulation, data processing and manipulation. diff --git a/science/py-DendroPy/pkg-message b/science/py-DendroPy/pkg-message deleted file mode 100644 index 1f71993d6f73..000000000000 --- a/science/py-DendroPy/pkg-message +++ /dev/null @@ -1,11 +0,0 @@ -[ -{ type: install - message: <<EOM -If you use this library either in whole or in part in your analysis, or -use any code derived from it, please cite it as: - - Sukumaran, J. and Mark T. Holder. 2010. DendroPy: A Python library - for phylogenetic computing. Bioinformatics 26: 1569-1571. -EOM -} -]home | help
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