Date: Tue, 27 Nov 2018 08:05:36 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r485989 - in head/misc: . snakemake Message-ID: <201811270805.wAR85aiW068218@repo.freebsd.org>
next in thread | raw e-mail | index | archive | help
Author: yuri Date: Tue Nov 27 08:05:36 2018 New Revision: 485989 URL: https://svnweb.freebsd.org/changeset/ports/485989 Log: New port: snakemake/Makefile: Workflow management system Added: head/misc/snakemake/ head/misc/snakemake/Makefile (contents, props changed) head/misc/snakemake/distinfo (contents, props changed) head/misc/snakemake/pkg-descr (contents, props changed) Modified: head/misc/Makefile Modified: head/misc/Makefile ============================================================================== --- head/misc/Makefile Tue Nov 27 07:53:33 2018 (r485988) +++ head/misc/Makefile Tue Nov 27 08:05:36 2018 (r485989) @@ -507,6 +507,7 @@ SUBDIR += sloccount SUBDIR += sls SUBDIR += smssend + SUBDIR += snakemake SUBDIR += soapysdr SUBDIR += solarized SUBDIR += spamcalc Added: head/misc/snakemake/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/misc/snakemake/Makefile Tue Nov 27 08:05:36 2018 (r485989) @@ -0,0 +1,29 @@ +# $FreeBSD$ + +PORTNAME= snakemake +DISTVERSION= 5.3.0 +CATEGORIES= misc +MASTER_SITES= CHEESESHOP + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Workflow management system + +LICENSE= MIT + +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}appdirs>0:devel/py-appdirs@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}configargparse>0:devel/py-configargparse@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}datrie>0:devel/py-datrie@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}docutils>0:textproc/py-docutils@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}GitPython>0:devel/py-gitpython@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}jsonschema>0:devel/py-jsonschema@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}ratelimiter>0:devel/py-ratelimiter@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}wrapt>0:devel/py-wrapt@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR} + +USES= python:3.5+ +USE_PYTHON= distutils autoplist + +NO_ARCH= yes + +.include <bsd.port.mk> Added: head/misc/snakemake/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/misc/snakemake/distinfo Tue Nov 27 08:05:36 2018 (r485989) @@ -0,0 +1,3 @@ +TIMESTAMP = 1543303780 +SHA256 (snakemake-5.3.0.tar.gz) = 612a16f2bba580c47183e4f752ed40b034852541ca3e96e480d01fb30ad9570c +SIZE (snakemake-5.3.0.tar.gz) = 168283 Added: head/misc/snakemake/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/misc/snakemake/pkg-descr Tue Nov 27 08:05:36 2018 (r485989) @@ -0,0 +1,7 @@ +Snakemake is a workflow management system that aims to reduce the complexity of +creating workflows by providing a fast and comfortable execution environment, +together with a clean and modern specification language in python style. +Snakemake workflows are essentially Python scripts extended by declarative code +to define rules. Rules describe how to create output files from input files. + +WWW: https://bitbucket.org/snakemake/snakemake/src/master/
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?201811270805.wAR85aiW068218>