Date: Sun, 31 Jul 2022 08:12:57 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: c7b296877cf8 - main - biology/viennarna: Update 2.5.0 -> 2.5.1 Message-ID: <202207310812.26V8CvqT085034@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=c7b296877cf88cf00873673bcdcb5109ab9f3f93 commit c7b296877cf88cf00873673bcdcb5109ab9f3f93 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2022-07-31 08:09:21 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2022-07-31 08:12:49 +0000 biology/viennarna: Update 2.5.0 -> 2.5.1 Also add test target. --- biology/viennarna/Makefile | 4 +++- biology/viennarna/distinfo | 6 +++--- biology/viennarna/pkg-plist | 4 ++-- 3 files changed, 8 insertions(+), 6 deletions(-) diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index b3efc36f81f0..31558cd140f9 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,5 +1,5 @@ PORTNAME= viennarna -DISTVERSION= 2.5.0 +DISTVERSION= 2.5.1 CATEGORIES= biology MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/ DISTNAME= ViennaRNA-${DISTVERSION} @@ -25,6 +25,8 @@ GNU_CONFIGURE= yes CONFIGURE_SHELL= ${PREFIX}/bin/bash CONFIGURE_ARGS= --enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl +TEST_TARGET= check + CONFLICTS_INSTALL= g2 # include/g2.h INFO= RNAlib diff --git a/biology/viennarna/distinfo b/biology/viennarna/distinfo index a39942444d22..2805208fdbc0 100644 --- a/biology/viennarna/distinfo +++ b/biology/viennarna/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1643064934 -SHA256 (ViennaRNA-2.5.0.tar.gz) = b85544650ee316743173ec9b30497cc4c559f1bfb8f66d16c563f780afd8c0c5 -SIZE (ViennaRNA-2.5.0.tar.gz) = 59332268 +TIMESTAMP = 1659253803 +SHA256 (ViennaRNA-2.5.1.tar.gz) = 05400437cf15595e10b1a25df6c9c48856f356130f9d1e380fa8866b6d27f457 +SIZE (ViennaRNA-2.5.1.tar.gz) = 58088049 diff --git a/biology/viennarna/pkg-plist b/biology/viennarna/pkg-plist index 4bb410abf849..d05270d41c73 100644 --- a/biology/viennarna/pkg-plist +++ b/biology/viennarna/pkg-plist @@ -17,6 +17,7 @@ bin/RNAforester bin/RNAheat bin/RNAinverse bin/RNAlocmin +bin/RNAmultifold bin/RNApaln bin/RNAparconv bin/RNApdist @@ -27,7 +28,6 @@ bin/RNApvmin bin/RNAsnoop bin/RNAsubopt bin/RNAup -bin/RNAmultifold bin/b2ct bin/ct2db bin/kinwalker @@ -138,7 +138,7 @@ include/ViennaRNA/plotting/RNApuzzler/RNApuzzler.h include/ViennaRNA/plotting/RNApuzzler/RNAturtle.h include/ViennaRNA/plotting/alignments.h include/ViennaRNA/plotting/layouts.h -include/ViennaRNA/plotting/naview.h +include/ViennaRNA/plotting/naview/naview.h include/ViennaRNA/plotting/probabilities.h include/ViennaRNA/plotting/structures.h include/ViennaRNA/plotting/utils.h
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