Date: Sun, 8 Nov 2015 16:39:58 +0000 (UTC) From: Kurt Jaeger <pi@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r401065 - head/biology/seqtools Message-ID: <201511081639.tA8GdwSp024283@repo.freebsd.org>
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Author: pi Date: Sun Nov 8 16:39:58 2015 New Revision: 401065 URL: https://svnweb.freebsd.org/changeset/ports/401065 Log: biology/seqtools: 4.36 -> 4.39.0 - Blixem o There is now an optional setting to highlight "maybe-canonical" splice sites in Blixem. This can be used to help identify problems where the strand is incorrect in the input data - it highlights splice sites in a different colour if they would be canonical were they on the other strand. o Fixed a bug with colinearity lines when an alignment's cigar string contains introns. o There are now separate feedback boxes for the selected sequence name coordinates. Hover over each box to see a tooltip describing its contents. Modified: head/biology/seqtools/Makefile head/biology/seqtools/distinfo Modified: head/biology/seqtools/Makefile ============================================================================== --- head/biology/seqtools/Makefile Sun Nov 8 16:36:07 2015 (r401064) +++ head/biology/seqtools/Makefile Sun Nov 8 16:39:58 2015 (r401065) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= seqtools -PORTVERSION= 4.36 +PORTVERSION= 4.39.0 CATEGORIES= biology MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/ Modified: head/biology/seqtools/distinfo ============================================================================== --- head/biology/seqtools/distinfo Sun Nov 8 16:36:07 2015 (r401064) +++ head/biology/seqtools/distinfo Sun Nov 8 16:39:58 2015 (r401065) @@ -1,2 +1,2 @@ -SHA256 (seqtools-4.36.tar.gz) = ee64a35ed65a106053c1211c0d3b9d6c4f51536b2a296a35539d1035547f7dbe -SIZE (seqtools-4.36.tar.gz) = 5594200 +SHA256 (seqtools-4.39.0.tar.gz) = a8f34d72dfaf662a4bf7739f5ffe7f00ead8f97a453ede4bc8387a02a3a5f865 +SIZE (seqtools-4.39.0.tar.gz) = 5601175
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