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Date:      Wed, 10 Apr 2013 07:42:30 +0000
From:      "Eggert, Lars" <lars@netapp.com>
To:        "current@freebsd.org" <current@freebsd.org>
Subject:   newnfs pkgng database corruption?
Message-ID:  <4C9A5BAE-8607-4E3A-8E69-E3993EA9873F@netapp.com>

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Hi,

on a diskless server, I keep the ports tree and pkgng databases on a newnfs NFSv4 mount. After a bunch of "portmaster -a" runs, the pkgng sqlite database appears to get corrupted. For example, when I try to update an existing port, this happens:

root@five:~ # portmaster ports-mgmt/pkg
...
===>   Registering installation for pkg-1.0.11
Installing pkg-1.0.11...pkg: sqlite: database disk image is malformed (pkgdb.c:925)
pkg: sqlite: database disk image is malformed (pkgdb.c:1914)
*** [fake-pkg] Error code 70

I have removed all ports and the pkgng databases and reinstalled, but the corruption seems to return after a few days or weeks of installing and deinstalling ports.

On another system that has a disk, that corruption of the pkgng database has not happened over six months or so. I therefore wonder if storing the sqlite database on an NFS-mount is triggering some sort of bug, either in pkgng or in newnfs. AFAIK, pkgng is using locks on the database quite liberally, could that be where a bug is lurking?

I'm happy to help debug this, but someone would need to let me know what to try.

Thanks,
Lars

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