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Date:      Thu, 28 Nov 2013 15:05:08 +0000 (UTC)
From:      Philippe Audeoud <jadawin@FreeBSD.org>
To:        ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org
Subject:   svn commit: r335098 - head/biology/p5-Bio-MAGETAB
Message-ID:  <201311281505.rASF58Oe081259@svn.freebsd.org>

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Author: jadawin
Date: Thu Nov 28 15:05:08 2013
New Revision: 335098
URL: http://svnweb.freebsd.org/changeset/ports/335098

Log:
  - Update to 1.28
  
  Sponsored by:	OBS

Modified:
  head/biology/p5-Bio-MAGETAB/Makefile
  head/biology/p5-Bio-MAGETAB/distinfo
  head/biology/p5-Bio-MAGETAB/pkg-plist   (contents, props changed)

Modified: head/biology/p5-Bio-MAGETAB/Makefile
==============================================================================
--- head/biology/p5-Bio-MAGETAB/Makefile	Thu Nov 28 14:56:08 2013	(r335097)
+++ head/biology/p5-Bio-MAGETAB/Makefile	Thu Nov 28 15:05:08 2013	(r335098)
@@ -2,7 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	Bio-MAGETAB
-PORTVERSION=	1.27
+PORTVERSION=	1.28
 CATEGORIES=	biology perl5
 MASTER_SITES=	CPAN
 PKGNAMEPREFIX=	p5-
@@ -29,65 +29,6 @@ TEST_DEPENDS=	p5-Test-Exception>=0.26:${
 USES=		perl5
 USE_PERL5=	configure
 
-MAN3=		Bio::MAGETAB.3 \
-		Bio::MAGETAB::ArrayDesign.3 \
-		Bio::MAGETAB::Assay.3 \
-		Bio::MAGETAB::BaseClass.3 \
-		Bio::MAGETAB::Comment.3 \
-		Bio::MAGETAB::CompositeElement.3 \
-		Bio::MAGETAB::Contact.3 \
-		Bio::MAGETAB::ControlledTerm.3 \
-		Bio::MAGETAB::Data.3 \
-		Bio::MAGETAB::DataAcquisition.3 \
-		Bio::MAGETAB::DataFile.3 \
-		Bio::MAGETAB::DataMatrix.3 \
-		Bio::MAGETAB::DatabaseEntry.3 \
-		Bio::MAGETAB::DesignElement.3 \
-		Bio::MAGETAB::Edge.3 \
-		Bio::MAGETAB::Event.3 \
-		Bio::MAGETAB::Extract.3 \
-		Bio::MAGETAB::Factor.3 \
-		Bio::MAGETAB::FactorValue.3 \
-		Bio::MAGETAB::Feature.3 \
-		Bio::MAGETAB::Investigation.3 \
-		Bio::MAGETAB::LabeledExtract.3 \
-		Bio::MAGETAB::Material.3 \
-		Bio::MAGETAB::MatrixColumn.3 \
-		Bio::MAGETAB::MatrixRow.3 \
-		Bio::MAGETAB::Measurement.3 \
-		Bio::MAGETAB::Node.3 \
-		Bio::MAGETAB::Normalization.3 \
-		Bio::MAGETAB::ParameterValue.3 \
-		Bio::MAGETAB::Protocol.3 \
-		Bio::MAGETAB::ProtocolApplication.3 \
-		Bio::MAGETAB::ProtocolParameter.3 \
-		Bio::MAGETAB::Publication.3 \
-		Bio::MAGETAB::Reporter.3 \
-		Bio::MAGETAB::SDRF.3 \
-		Bio::MAGETAB::SDRFRow.3 \
-		Bio::MAGETAB::Sample.3 \
-		Bio::MAGETAB::Source.3 \
-		Bio::MAGETAB::TermSource.3 \
-		Bio::MAGETAB::Types.3 \
-		Bio::MAGETAB::Util::Builder.3 \
-		Bio::MAGETAB::Util::DBLoader.3 \
-		Bio::MAGETAB::Util::Persistence.3 \
-		Bio::MAGETAB::Util::Reader.3 \
-		Bio::MAGETAB::Util::Reader::ADF.3 \
-		Bio::MAGETAB::Util::Reader::DataMatrix.3 \
-		Bio::MAGETAB::Util::Reader::IDF.3 \
-		Bio::MAGETAB::Util::Reader::SDRF.3 \
-		Bio::MAGETAB::Util::Reader::Tabfile.3 \
-		Bio::MAGETAB::Util::Reader::TagValueFile.3 \
-		Bio::MAGETAB::Util::RewriteAE.3 \
-		Bio::MAGETAB::Util::Writer.3 \
-		Bio::MAGETAB::Util::Writer::ADF.3 \
-		Bio::MAGETAB::Util::Writer::GraphViz.3 \
-		Bio::MAGETAB::Util::Writer::IDF.3 \
-		Bio::MAGETAB::Util::Writer::SDRF.3 \
-		Bio::MAGETAB::Util::Writer::Tabfile.3
-
-NO_STAGE=	yes
 post-patch:
 	@${REINPLACE_CMD} -e '/^auto_install;/d' ${WRKSRC}/Makefile.PL
 

Modified: head/biology/p5-Bio-MAGETAB/distinfo
==============================================================================
--- head/biology/p5-Bio-MAGETAB/distinfo	Thu Nov 28 14:56:08 2013	(r335097)
+++ head/biology/p5-Bio-MAGETAB/distinfo	Thu Nov 28 15:05:08 2013	(r335098)
@@ -1,2 +1,2 @@
-SHA256 (Bio-MAGETAB-1.27.tar.gz) = 46017303ce51f8ba749d363cd763792273df96602d28f1d2de5c2947530cdb4d
-SIZE (Bio-MAGETAB-1.27.tar.gz) = 254374
+SHA256 (Bio-MAGETAB-1.28.tar.gz) = 75e0e52300400bb6e73d2593ac29ef87fcf28653c0a7a039c2c937abcedb5a08
+SIZE (Bio-MAGETAB-1.28.tar.gz) = 260154

Modified: head/biology/p5-Bio-MAGETAB/pkg-plist
==============================================================================
--- head/biology/p5-Bio-MAGETAB/pkg-plist	Thu Nov 28 14:56:08 2013	(r335097)
+++ head/biology/p5-Bio-MAGETAB/pkg-plist	Thu Nov 28 15:05:08 2013	(r335098)
@@ -60,6 +60,63 @@ bin/unload_magetab_namespace.pl
 %%SITE_PERL%%/Bio/MAGETAB/FactorValue.pm
 %%SITE_PERL%%/Bio/MAGETAB/DataMatrix.pm
 %%SITE_PERL%%/Bio/MAGETAB.pm
+%%PERL5_MAN3%%/Bio::MAGETAB.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::ArrayDesign.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Assay.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::BaseClass.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Comment.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::CompositeElement.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Contact.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::ControlledTerm.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Data.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::DataAcquisition.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::DataFile.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::DataMatrix.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::DatabaseEntry.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::DesignElement.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Edge.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Event.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Extract.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Factor.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::FactorValue.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Feature.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Investigation.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::LabeledExtract.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Material.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::MatrixColumn.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::MatrixRow.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Measurement.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Node.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Normalization.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::ParameterValue.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Protocol.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::ProtocolApplication.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::ProtocolParameter.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Publication.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Reporter.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::SDRF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::SDRFRow.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Sample.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Source.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::TermSource.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Types.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Builder.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::DBLoader.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Persistence.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::ADF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::DataMatrix.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::IDF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::SDRF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::Tabfile.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::TagValueFile.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::RewriteAE.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::ADF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::GraphViz.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::IDF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::SDRF.3.gz
+%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::Tabfile.3.gz
 @dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/MAGETAB
 @dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio
 @dirrm %%SITE_PERL%%/Bio/MAGETAB/Util/Reader

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