Date: Mon, 05 Feb 2018 13:58:10 +0000 From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 225682] [maintainer-update] biology/seqan and biology/seqan-apps Message-ID: <bug-225682-13@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D225682 Bug ID: 225682 Summary: [maintainer-update] biology/seqan and biology/seqan-apps Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Some People Priority: --- Component: Individual Port(s) Assignee: freebsd-ports-bugs@FreeBSD.org Reporter: h2+fbsdports@fsfe.org Created attachment 190337 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D190337&action= =3Dedit update for biology/seqan * update both ports to 2.4.0 * add OPTIMIZED_CFLAGS option to biology/seqan-apps * move a section of the biology/seqan-apps/Makefile around to satisfy port= lint * remove BROKEN_* from biology/seqan-apps/Makefile because upstream now cla= ims support for these architectures biology/seqan: root@celegans /usr/ports/biology/seqan # portlint looks fine. root@celegans /usr/ports/biology/seqan # make check-plist =3D=3D=3D=3D> Checking for pkg-plist issues (check-plist) =3D=3D=3D> Parsing plist =3D=3D=3D> Checking for items in STAGEDIR missing from pkg-plist =3D=3D=3D> Checking for items in pkg-plist which are not in STAGEDIR =3D=3D=3D> No pkg-plist issues found (check-plist) root@celegans /usr/ports/biology/seqan # make stage-qa =3D=3D=3D=3D> Running Q/A tests (stage-qa) /!\ To run stage-qa automatically add DEVELOPER=3Dyes to your environment /= !\ biology/seqan-apps: root@celegans /usr/ports/biology/seqan-apps # portlint looks fine. root@celegans /usr/ports/biology/seqan-apps # make check-plist =3D=3D=3D=3D> Checking for pkg-plist issues (check-plist) =3D=3D=3D> Parsing plist =3D=3D=3D> Checking for items in STAGEDIR missing from pkg-plist =3D=3D=3D> Checking for items in pkg-plist which are not in STAGEDIR =3D=3D=3D> No pkg-plist issues found (check-plist) root@celegans /usr/ports/biology/seqan-apps # make stage-qa =3D=3D=3D=3D> Running Q/A tests (stage-qa) /!\ To run stage-qa automatically add DEVELOPER=3Dyes to your environment /= !\ root@celegans /usr/ports/biology/seqan-apps # --=20 You are receiving this mail because: You are the assignee for the bug.=
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