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Date:      Wed, 30 Oct 2024 15:48:55 GMT
From:      Yuri Victorovich <yuri@FreeBSD.org>
To:        ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org
Subject:   git: 005a38320611 - main - science/py-hoomd-blue: update 4.8.2 =?utf-8?Q?=E2=86=92?= 4.9.0
Message-ID:  <202410301548.49UFmtu2056418@gitrepo.freebsd.org>

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The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=005a3832061179ff4ec7f8589ebd2e2e61ae31fa

commit 005a3832061179ff4ec7f8589ebd2e2e61ae31fa
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-10-30 15:48:41 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-10-30 15:48:53 +0000

    science/py-hoomd-blue: update 4.8.2 → 4.9.0
    
    Reported by:    portscout
---
 science/py-hoomd-blue/Makefile  |  5 +++--
 science/py-hoomd-blue/distinfo  |  6 +++---
 science/py-hoomd-blue/pkg-plist | 25 +++++++++++++++++++++++++
 3 files changed, 31 insertions(+), 5 deletions(-)

diff --git a/science/py-hoomd-blue/Makefile b/science/py-hoomd-blue/Makefile
index d9bf9b4ec882..987154f94ad6 100644
--- a/science/py-hoomd-blue/Makefile
+++ b/science/py-hoomd-blue/Makefile
@@ -1,12 +1,13 @@
 PORTNAME=	hoomd-blue
 DISTVERSIONPREFIX=	v
-DISTVERSION=	4.8.2
+DISTVERSION=	4.9.0
 CATEGORIES=	science # physics
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Molecular dynamics and Monte Carlo soft matter simulation
-WWW=		https://glotzerlab.engin.umich.edu/hoomd-blue/
+WWW=		https://glotzerlab.engin.umich.edu/hoomd-blue/ \
+		https://github.com/glotzerlab/hoomd-blue
 
 LICENSE=	BSD3CLAUSE
 LICENSE_FILE=	${WRKSRC}/LICENSE
diff --git a/science/py-hoomd-blue/distinfo b/science/py-hoomd-blue/distinfo
index 96d937c53171..2eac5be078b3 100644
--- a/science/py-hoomd-blue/distinfo
+++ b/science/py-hoomd-blue/distinfo
@@ -1,6 +1,6 @@
-TIMESTAMP = 1721889482
-SHA256 (glotzerlab-hoomd-blue-v4.8.2_GH0.tar.gz) = e4359d57d44c8560b88755a8808796bc6d4c2e1d1d4a06adc876c94ba2616929
-SIZE (glotzerlab-hoomd-blue-v4.8.2_GH0.tar.gz) = 2809858
+TIMESTAMP = 1730276977
+SHA256 (glotzerlab-hoomd-blue-v4.9.0_GH0.tar.gz) = 913322b9054a4ece0107697e5e6f3985f2f6f3e45ff45630e329cbd853744924
+SIZE (glotzerlab-hoomd-blue-v4.9.0_GH0.tar.gz) = 2940565
 SHA256 (glotzerlab-upp11-0c1fb8d_GH0.tar.gz) = fe9db1b06fd504876e243c9031a594edbd0323e8337f908885f31cc980f642e9
 SIZE (glotzerlab-upp11-0c1fb8d_GH0.tar.gz) = 21024
 SHA256 (glotzerlab-nano-signal-slot-34223a4_GH0.tar.gz) = bfe51f7dd2cc097b70202f849c1a42a13ea5f53a1e902e053df155c3a157c30b
diff --git a/science/py-hoomd-blue/pkg-plist b/science/py-hoomd-blue/pkg-plist
index 04a8bf079eda..c1ea9dbfddf3 100644
--- a/science/py-hoomd-blue/pkg-plist
+++ b/science/py-hoomd-blue/pkg-plist
@@ -55,6 +55,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/angular_step.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/expanded_gaussian.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/lennard_jones.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/lj_gauss.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/opp.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/pair.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/step.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/union.py
@@ -74,6 +76,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_angular_step.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_expanded_gaussian.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_lennard_jones.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_lj_gauss.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_opp.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_step.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_union.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_union_user.py
@@ -507,7 +511,9 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotential.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialAngularStep.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialExpandedGaussian.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialLJGauss.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialLennardJones.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialOPP.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialStep.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/PairPotentialUnion.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/hpmc/ShapeConvexPolygon.h
@@ -548,6 +554,11 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AnisoPotentialPair.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AnisoPotentialPairGPU.cuh
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AnisoPotentialPairGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AreaConservationMeshForceCompute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AreaConservationMeshForceComputeGPU.cuh
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/AreaConservationMeshForceComputeGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/BendingRigidityMeshForceCompute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/BendingRigidityMeshForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/BondTablePotential.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/BondTablePotentialGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/CommunicatorGrid.h
@@ -613,6 +624,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/HarmonicDihedralForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/HarmonicImproperForceCompute.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/HarmonicImproperForceComputeGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/HelfrichMeshForceCompute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/HelfrichMeshForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/IntegrationMethodTwoStep.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/IntegratorTwoStep.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/ManifoldDiamond.h
@@ -639,6 +652,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/OPLSDihedralForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PPPMForceCompute.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PPPMForceComputeGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PairModulator.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PatchEnvelope.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PeriodicImproper.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PeriodicImproperForceCompute.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/PeriodicImproperForceComputeGPU.h
@@ -664,6 +679,9 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TableAngleForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TableDihedralForceCompute.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TableDihedralForceComputeGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TriangleAreaConservationMeshForceCompute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TriangleAreaConservationMeshForceComputeGPU.cuh
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TriangleAreaConservationMeshForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepBD.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepBDGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepConstantPressure.h
@@ -682,6 +700,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepRATTLENVE.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepRATTLENVEGPU.cuh
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/TwoStepRATTLENVEGPU.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/VolumeConservationMeshForceCompute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/VolumeConservationMeshForceComputeGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/WallData.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/ZeroMomentumUpdater.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/metal/EAMForceCompute.h
@@ -699,6 +719,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/Communicator.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/CommunicatorUtilities.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/ConstantForce.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/CosineChannelGeometry.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/CosineExpansionContractionGeometry.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/Integrator.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/ManualVirtualParticleFiller.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/NoForce.h
@@ -744,7 +766,9 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/md/manifold.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/many_body.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/mesh/__init__.py
+%%PYTHON_SITELIBDIR%%/hoomd/md/mesh/bending.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/mesh/bond.py
+%%PYTHON_SITELIBDIR%%/hoomd/md/mesh/conservation.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/mesh/potential.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/methods/__init__.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/methods/methods.py
@@ -788,6 +812,7 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_minimize_fire.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_nlist.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_nlist_tuner.py
+%%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_patch.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_potential.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_pppm_coulomb.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/pytest/test_reverse_perturbation_flow.py



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