Date: Wed, 22 Jan 2025 11:27:50 GMT From: Piotr Kubaj <pkubaj@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 989b3863994b - main - biology/stacks: fix build without libomp Message-ID: <202501221127.50MBRoWL046853@gitrepo.freebsd.org>
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The branch main has been updated by pkubaj: URL: https://cgit.FreeBSD.org/ports/commit/?id=989b3863994b82a4030031f940dfb3561d15c825 commit 989b3863994b82a4030031f940dfb3561d15c825 Author: Piotr Kubaj <pkubaj@FreeBSD.org> AuthorDate: 2025-01-21 21:20:02 +0000 Commit: Piotr Kubaj <pkubaj@FreeBSD.org> CommitDate: 2025-01-22 11:27:04 +0000 biology/stacks: fix build without libomp src/process_radtags.cc:1578:6: error: unknown type name 'omp_lock_t' 1578 | omp_lock_t &thread_outbuf_lock = outbuf_lock[thread_index]; | ^ 25 warnings and 10 errors generated. --- biology/stacks/Makefile | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/biology/stacks/Makefile b/biology/stacks/Makefile index 5e1b270e1b98..e0264aa59d58 100644 --- a/biology/stacks/Makefile +++ b/biology/stacks/Makefile @@ -10,7 +10,12 @@ WWW= https://catchenlab.life.illinois.edu/stacks/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE -USES= compiler:c++11-lang gmake python shebangfix +USES= gmake python shebangfix +.if !exists(/usr/include/omp.h) +USES+= compiler:gcc-c++11-lib +.else +USES+= compiler:c++11-lang +.endif SHEBANG_FILES= scripts/*
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