Date: Sat, 20 Jun 2009 05:06:43 GMT From: Wen Heping <wenheping@gmail.com> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/135856: [NEW PORT]biology/rubygem-bioruby:Integrated environment for Bioinformatics written in Ruby Message-ID: <200906200506.n5K56h83041652@www.freebsd.org> Resent-Message-ID: <200906200510.n5K5A2Rx027261@freefall.freebsd.org>
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>Number: 135856 >Category: ports >Synopsis: [NEW PORT]biology/rubygem-bioruby:Integrated environment for Bioinformatics written in Ruby >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Sat Jun 20 05:10:02 UTC 2009 >Closed-Date: >Last-Modified: >Originator: Wen Heping >Release: FreeBSD 8.0-CURRENT >Organization: ChangAn Middle School >Environment: FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Mar 22 22:12:06 CST 2009 root@fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC i386 >Description: BioRuby project aims to implement integrated environment for Bioinformatics by using Ruby. WWW: http://bioruby.org/ ( This port actually is the same ruby application as biology/ruby-bio, shall we repocopy it from biology/ruby-bio ? ) >How-To-Repeat: >Fix: Patch attached with submission follows: # This is a shell archive. Save it in a file, remove anything before # this line, and then unpack it by entering "sh file". Note, it may # create directories; files and directories will be owned by you and # have default permissions. # # This archive contains: # # rubygem-bioruby # rubygem-bioruby/Makefile # rubygem-bioruby/distinfo # rubygem-bioruby/pkg-descr # echo c - rubygem-bioruby mkdir -p rubygem-bioruby > /dev/null 2>&1 echo x - rubygem-bioruby/Makefile sed 's/^X//' >rubygem-bioruby/Makefile << '530bb826a2696c4ebf934c5c36589c09' X# New ports collection makefile for: rubygem-bioruby X# Date created: 20 June, 2009 X# Whom: Wen Heping <wenheping@gmail.com> X# X# $FreeBSD$ X# X XPORTNAME= bioruby XPORTVERSION= 1.3.0 XCATEGORIES= devel rubygems XMASTER_SITES= RF XDISTNAME= bio-${PORTVERSION} X XMAINTAINER= wenheping@gmail.com XCOMMENT= Integrated environment for Bioinformatics written in Ruby X XPLIST_FILES= bin/bioruby \ X bin/br_biofetch.rb \ X bin/br_bioflat.rb \ X bin/br_biogetseq.rb \ X bin/br_pmfetch.rb X XUSE_RUBY= yes XUSE_RUBYGEMS= yes XRUBYGEM_AUTOPLIST= yes XGEM_NAME= ${DISTNAME} X X.include <bsd.port.mk> 530bb826a2696c4ebf934c5c36589c09 echo x - rubygem-bioruby/distinfo sed 's/^X//' >rubygem-bioruby/distinfo << '3614f29ee230b76aefbc16d0b067511c' XMD5 (rubygem/bio-1.3.0.gem) = 23d28f07311b769265ba4a764716cd13 XSHA256 (rubygem/bio-1.3.0.gem) = e2441f967e1dfbfff6eb57d81e148976290f3ce78b234a71d88a94c7343644cf XSIZE (rubygem/bio-1.3.0.gem) = 914944 3614f29ee230b76aefbc16d0b067511c echo x - rubygem-bioruby/pkg-descr sed 's/^X//' >rubygem-bioruby/pkg-descr << 'b49810fb549b553b81e8bd98fe34c74e' XBioRuby project aims to implement integrated environment for XBioinformatics by using Ruby. X XWWW: http://bioruby.org/ b49810fb549b553b81e8bd98fe34c74e exit >Release-Note: >Audit-Trail: >Unformatted:
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