Date: Thu, 05 Mar 2026 12:44:16 +0000 From: Jason W. Bacon <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 746a50b935da - main - biology/atac-seq: Update to 0.3.0 Message-ID: <69a97aa0.47eb2.212ca145@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=746a50b935da1b888b10c57ee0789a39903814ce commit 746a50b935da1b888b10c57ee0789a39903814ce Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2026-03-05 12:43:27 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2026-03-05 12:43:27 +0000 biology/atac-seq: Update to 0.3.0 Add biology/fasda-utils to metaport depends --- biology/atac-seq/Makefile | 9 ++++++--- biology/atac-seq/distinfo | 2 +- 2 files changed, 7 insertions(+), 4 deletions(-) diff --git a/biology/atac-seq/Makefile b/biology/atac-seq/Makefile index d24e8007fcf1..a35f746a21ec 100644 --- a/biology/atac-seq/Makefile +++ b/biology/atac-seq/Makefile @@ -1,6 +1,8 @@ PORTNAME= atac-seq -DISTVERSION= 0.2.0 -PORTREVISION= 1 +# Update major version only if the metaport is overhauled +# Update minor version when adding or removing dependencies +# Update revision for all other changes +DISTVERSION= 0.3.0 CATEGORIES= biology python MASTER_SITES= # empty @@ -20,6 +22,7 @@ RUN_DEPENDS= sra-tools>0:biology/sra-tools \ samtools>0:biology/samtools \ ${PYTHON_PKGNAMEPREFIX}macs2>0:biology/py-macs2@${PY_FLAVOR} \ fasda>0:biology/fasda \ + fasda-utils>0:biology/fasda-utils \ peak-classifier>0:biology/peak-classifier \ webbrowser>0:www/webbrowser \ curl>0:ftp/curl @@ -28,7 +31,7 @@ USES= metaport python .include <bsd.port.options.mk> -.if ${OPSYS} != FreeBSD +.if ${OPSYS} != FreeBSD || ${OSVERSION} >= 1302509 RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}MACS3>0:biology/py-macs3@${PY_FLAVOR} .endif diff --git a/biology/atac-seq/distinfo b/biology/atac-seq/distinfo index 968e68a80fb0..7ab5dc3a527d 100644 --- a/biology/atac-seq/distinfo +++ b/biology/atac-seq/distinfo @@ -1 +1 @@ -TIMESTAMP = 1704902712 +TIMESTAMP = 1772714589home | help
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