Date: Thu, 11 Jun 2026 18:24:30 +0000 From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 0327d1191d93 - main - biology/py-PySCeS: update 1.2.=?utf-8?Q?2 =E2=86=92 1.?=2.3 Message-ID: <6a2afd5e.42e3e.5082e509@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=0327d1191d9320e9eb33ee83219bc2a98f847f76 commit 0327d1191d9320e9eb33ee83219bc2a98f847f76 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2026-06-11 17:10:42 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2026-06-11 18:24:28 +0000 biology/py-PySCeS: update 1.2.2 → 1.2.3 --- biology/py-PySCeS/Makefile | 14 +++++++------- biology/py-PySCeS/distinfo | 6 +++--- 2 files changed, 10 insertions(+), 10 deletions(-) diff --git a/biology/py-PySCeS/Makefile b/biology/py-PySCeS/Makefile index b6824a2d904c..7212074a9b2e 100644 --- a/biology/py-PySCeS/Makefile +++ b/biology/py-PySCeS/Makefile @@ -1,10 +1,8 @@ PORTNAME= pysces -DISTVERSION= 1.2.2 -PORTREVISION= 3 +DISTVERSION= 1.2.3 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} -DISTNAME= ${PORTNAME:tl}-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Python Simulator for Cellular Systems @@ -14,12 +12,12 @@ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}meson-python>0:devel/meson-python@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}numpy>=1.16:math/py-numpy@${PY_FLAVOR} -PY_EXTRA= ${PYTHON_PKGNAMEPREFIX}python-libsbml>0:biology/py-python-libsbml@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.16:math/py-numpy@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}numpy>=2.0.0,1:math/py-numpy@${PY_FLAVOR} +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.23.5,1:math/py-numpy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \ - ${PY_EXTRA} + ${PYTHON_PKGNAMEPREFIX}numdifftools>0:math/py-numdifftools@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}python-libsbml>0:biology/py-python-libsbml@${PY_FLAVOR} USES= fortran localbase:ldflags python USE_PYTHON= pep517 autoplist pytest @@ -38,4 +36,6 @@ post-install: do-test: # from section 2.1 Loading PySCeS in http://pysces.sourceforge.net/pdf/userguide.pdf @${SETENV} ${TEST_ENV} ${PYTHON_CMD} -c "import pysces; pysces.test();" +# tests as of 1.2.3: 30 tests passed + .include <bsd.port.mk> diff --git a/biology/py-PySCeS/distinfo b/biology/py-PySCeS/distinfo index 88232acfde21..2a5e72be7cad 100644 --- a/biology/py-PySCeS/distinfo +++ b/biology/py-PySCeS/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1722664974 -SHA256 (pysces-1.2.2.tar.gz) = 8d71e330594d63281ed88de9925776497f57c0952092d2a87df0c031cb6c8101 -SIZE (pysces-1.2.2.tar.gz) = 2754765 +TIMESTAMP = 1781153152 +SHA256 (pysces-1.2.3.tar.gz) = 437487624c3127f0bc5adc28b639a3ee4cbe614f2554857b3ab4c1f3813ffe42 +SIZE (pysces-1.2.3.tar.gz) = 2775077home | help
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