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Date:      Sat, 1 Jun 2019 07:40:23 +0000 (UTC)
From:      Yuri Victorovich <yuri@FreeBSD.org>
To:        ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org
Subject:   svn commit: r503225 - in head/graphics: . mirtk
Message-ID:  <201906010740.x517eNU3006944@repo.freebsd.org>

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Author: yuri
Date: Sat Jun  1 07:40:23 2019
New Revision: 503225
URL: https://svnweb.freebsd.org/changeset/ports/503225

Log:
  New port: graphics/mirtk: Medical Image Registration ToolKit (MIRTK)

Added:
  head/graphics/mirtk/
  head/graphics/mirtk/Makefile   (contents, props changed)
  head/graphics/mirtk/distinfo   (contents, props changed)
  head/graphics/mirtk/pkg-descr   (contents, props changed)
  head/graphics/mirtk/pkg-plist   (contents, props changed)
Modified:
  head/graphics/Makefile

Modified: head/graphics/Makefile
==============================================================================
--- head/graphics/Makefile	Sat Jun  1 07:39:39 2019	(r503224)
+++ head/graphics/Makefile	Sat Jun  1 07:40:23 2019	(r503225)
@@ -551,6 +551,7 @@
     SUBDIR += minder
     SUBDIR += ming
     SUBDIR += mirage
+    SUBDIR += mirtk
     SUBDIR += mmrecover
     SUBDIR += movit
     SUBDIR += mozjpeg

Added: head/graphics/mirtk/Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/graphics/mirtk/Makefile	Sat Jun  1 07:40:23 2019	(r503225)
@@ -0,0 +1,28 @@
+# $FreeBSD$
+
+PORTNAME=	mirtk
+DISTVERSIONPREFIX=	v
+DISTVERSION=	2.0.0-42
+DISTVERSIONSUFFIX=	-g7390df6
+CATEGORIES=	graphics
+
+MAINTAINER=	yuri@FreeBSD.org
+COMMENT=	Medical Image Registration ToolKit (MIRTK)
+
+LICENSE=	APACHE20
+LICENSE_FILE=	${WRKSRC}/LICENSE.txt
+
+BUILD_DEPENDS=	boost-libs>0:devel/boost-libs \
+		nifticlib>0:science/nifticlib
+
+USES=		cmake compiler:c++11-lang eigen:3 perl5 python
+USE_GITHUB=	yes
+GH_ACCOUNT=	BioMedIA
+GH_PROJECT=	${PORTNAME:tu}
+USE_LDCONFIG=	yes
+
+post-stage: # https://github.com/BioMedIA/MIRTK/issues/674
+	@${RM} ${STAGEDIR}${PREFIX}/bin/uninstall-mirtk
+	@${REINPLACE_CMD} -i '' 's|${STAGEDIR}||' ${STAGEDIR}${PREFIX}/lib/cmake/mirtk/MIRTKInstallManifest.txt
+
+.include <bsd.port.mk>

Added: head/graphics/mirtk/distinfo
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/graphics/mirtk/distinfo	Sat Jun  1 07:40:23 2019	(r503225)
@@ -0,0 +1,3 @@
+TIMESTAMP = 1559372079
+SHA256 (BioMedIA-MIRTK-v2.0.0-42-g7390df6_GH0.tar.gz) = 9f6103cf15d58e062245d8e349b2fe4963e23a587bbbf5c91a93c9a2541c0439
+SIZE (BioMedIA-MIRTK-v2.0.0-42-g7390df6_GH0.tar.gz) = 2834975

Added: head/graphics/mirtk/pkg-descr
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/graphics/mirtk/pkg-descr	Sat Jun  1 07:40:23 2019	(r503225)
@@ -0,0 +1,8 @@
+The MIRTK is a research-focused image processing toolkit, developed at the
+BioMedIA research group. It provides a collection of libraries and command-line
+tools to assist in processing and analyzing imaging data. The main application
+of the MIRTK is in adult and neonatal brain MR image registration as well as the
+reconstruction of cortical surface meshes. The modular project organization of
+the MIRTK enables the installation of selected modules.
+
+WWW: https://mirtk.github.io/

Added: head/graphics/mirtk/pkg-plist
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/graphics/mirtk/pkg-plist	Sat Jun  1 07:40:23 2019	(r503225)
@@ -0,0 +1,530 @@
+bin/mirtk
+include/mirtk/AdaptiveLineSearch.h
+include/mirtk/AffineTransformation.h
+include/mirtk/Algorithm.h
+include/mirtk/Allocate.h
+include/mirtk/Arith.h
+include/mirtk/Arpack.h
+include/mirtk/Array.h
+include/mirtk/ArrayHeap.h
+include/mirtk/Assert.h
+include/mirtk/BSpline.h
+include/mirtk/BSplineFreeFormTransformation3D.h
+include/mirtk/BSplineFreeFormTransformation4D.h
+include/mirtk/BSplineFreeFormTransformationSV.h
+include/mirtk/BSplineFreeFormTransformationStatistical.h
+include/mirtk/BSplineFreeFormTransformationTD.h
+include/mirtk/BSplineInterpolateImageFunction.h
+include/mirtk/BSplineInterpolateImageFunction.hxx
+include/mirtk/BSplineInterpolateImageFunction2D.h
+include/mirtk/BSplineInterpolateImageFunction2D.hxx
+include/mirtk/BSplineInterpolateImageFunction3D.h
+include/mirtk/BSplineInterpolateImageFunction3D.hxx
+include/mirtk/BSplineInterpolateImageFunction4D.h
+include/mirtk/BSplineInterpolateImageFunction4D.hxx
+include/mirtk/BaseImage.h
+include/mirtk/BinaryVoxelFunction.h
+include/mirtk/BrentLineSearch.h
+include/mirtk/CSplineInterpolateImageFunction.h
+include/mirtk/CSplineInterpolateImageFunction.hxx
+include/mirtk/CSplineInterpolateImageFunction2D.h
+include/mirtk/CSplineInterpolateImageFunction2D.hxx
+include/mirtk/CSplineInterpolateImageFunction3D.h
+include/mirtk/CSplineInterpolateImageFunction3D.hxx
+include/mirtk/CSplineInterpolateImageFunction4D.h
+include/mirtk/CSplineInterpolateImageFunction4D.hxx
+include/mirtk/Cfstream.h
+include/mirtk/CharbonnierErrorFunction.h
+include/mirtk/Cifstream.h
+include/mirtk/CityBlockDistanceTransform.h
+include/mirtk/Closing.h
+include/mirtk/Cofstream.h
+include/mirtk/Common.h
+include/mirtk/CommonConfig.h
+include/mirtk/CommonExport.h
+include/mirtk/Config.h
+include/mirtk/Configurable.h
+include/mirtk/ConjugateGradientDescent.h
+include/mirtk/ConnectedComponents.h
+include/mirtk/ConstExtrapolateImageFunction.h
+include/mirtk/ConstExtrapolateImageFunctionWithPeriodicTime.h
+include/mirtk/ConstGenericImageIterator.h
+include/mirtk/ConstImageIterator.h
+include/mirtk/ConstraintMeasure.h
+include/mirtk/ConvolutionFunction.h
+include/mirtk/CosineOfNormalizedGradientField.h
+include/mirtk/CubicBSplineConvolution.h
+include/mirtk/CubicBSplineInterpolateImageFunction.h
+include/mirtk/CubicBSplineInterpolateImageFunction.hxx
+include/mirtk/CubicBSplineInterpolateImageFunction2D.h
+include/mirtk/CubicBSplineInterpolateImageFunction2D.hxx
+include/mirtk/CubicBSplineInterpolateImageFunction3D.h
+include/mirtk/CubicBSplineInterpolateImageFunction3D.hxx
+include/mirtk/CubicBSplineInterpolateImageFunction4D.h
+include/mirtk/CubicBSplineInterpolateImageFunction4D.hxx
+include/mirtk/Cuda.h
+include/mirtk/CudaRuntime.h
+include/mirtk/CurrentsDistance.h
+include/mirtk/CutilMath.h
+include/mirtk/DataFidelity.h
+include/mirtk/DataFunctions.h
+include/mirtk/DataOp.h
+include/mirtk/DataSelection.h
+include/mirtk/DataStatistics.h
+include/mirtk/Deallocate.h
+include/mirtk/DifferenceOfCompositionLieBracketImageFilter3D.h
+include/mirtk/Dilation.h
+include/mirtk/DisplacementFieldExp.h
+include/mirtk/DisplacementToVelocityField.h
+include/mirtk/DisplacementToVelocityFieldBCH.h
+include/mirtk/DistanceErrorFunction.h
+include/mirtk/Downsampling.h
+include/mirtk/Eigen.h
+include/mirtk/EnergyMeasure.h
+include/mirtk/EnergyTerm.h
+include/mirtk/EnergyThreshold.h
+include/mirtk/Erosion.h
+include/mirtk/EuclideanDistanceTransform.h
+include/mirtk/Event.h
+include/mirtk/EventDelegate.h
+include/mirtk/Exception.h
+include/mirtk/ExtrapolateImageFunction.h
+include/mirtk/ExtrapolationMode.h
+include/mirtk/FFDIntegrationMethod.h
+include/mirtk/FastCubicBSplineInterpolateImageFunction.h
+include/mirtk/FastCubicBSplineInterpolateImageFunction.hxx
+include/mirtk/FastCubicBSplineInterpolateImageFunction2D.h
+include/mirtk/FastCubicBSplineInterpolateImageFunction2D.hxx
+include/mirtk/FastCubicBSplineInterpolateImageFunction3D.h
+include/mirtk/FastCubicBSplineInterpolateImageFunction3D.hxx
+include/mirtk/FastCubicBSplineInterpolateImageFunction4D.h
+include/mirtk/FastCubicBSplineInterpolateImageFunction4D.hxx
+include/mirtk/FastDelegate.h
+include/mirtk/FastLinearImageGradientFunction.h
+include/mirtk/FastLinearImageGradientFunction.hxx
+include/mirtk/FastLinearImageGradientFunction2D.h
+include/mirtk/FastLinearImageGradientFunction2D.hxx
+include/mirtk/FastLinearImageGradientFunction3D.h
+include/mirtk/FastLinearImageGradientFunction3D.hxx
+include/mirtk/FiducialRegistrationError.h
+include/mirtk/FluidFreeFormTransformation.h
+include/mirtk/ForEachBinaryVoxelFunction.h
+include/mirtk/ForEachNonaryVoxelFunction.h
+include/mirtk/ForEachOctaryVoxelFunction.h
+include/mirtk/ForEachQuaternaryVoxelFunction.h
+include/mirtk/ForEachQuinaryVoxelFunction.h
+include/mirtk/ForEachSenaryVoxelFunction.h
+include/mirtk/ForEachSeptenaryVoxelFunction.h
+include/mirtk/ForEachTernaryVoxelFunction.h
+include/mirtk/ForEachUnaryVoxelFunction.h
+include/mirtk/FreeFormTransformation.h
+include/mirtk/FreeFormTransformation3D.h
+include/mirtk/FreeFormTransformation4D.h
+include/mirtk/GIPLImageReader.h
+include/mirtk/GIPLImageWriter.h
+include/mirtk/GaussianBlurring.h
+include/mirtk/GaussianBlurring2D.h
+include/mirtk/GaussianBlurring4D.h
+include/mirtk/GaussianBlurringWithPadding.h
+include/mirtk/GaussianBlurringWithPadding2D.h
+include/mirtk/GaussianErrorFunction.h
+include/mirtk/GaussianInterpolateImageFunction.h
+include/mirtk/GaussianInterpolateImageFunction.hxx
+include/mirtk/GaussianInterpolateImageFunction2D.h
+include/mirtk/GaussianInterpolateImageFunction2D.hxx
+include/mirtk/GaussianInterpolateImageFunction3D.h
+include/mirtk/GaussianInterpolateImageFunction3D.hxx
+include/mirtk/GaussianInterpolateImageFunction4D.h
+include/mirtk/GaussianInterpolateImageFunction4D.hxx
+include/mirtk/GaussianPyramidFilter.h
+include/mirtk/GenericImage.h
+include/mirtk/GenericImageIterator.h
+include/mirtk/GenericRegistrationDebugger.h
+include/mirtk/GenericRegistrationFilter.h
+include/mirtk/GenericRegistrationLogger.h
+include/mirtk/GradientDescent.h
+include/mirtk/GradientFieldSimilarity.h
+include/mirtk/GradientImageFilter.h
+include/mirtk/HashImage.h
+include/mirtk/HashImage.hxx
+include/mirtk/HessianImageFilter.h
+include/mirtk/Histogram1D.h
+include/mirtk/Histogram2D.h
+include/mirtk/HistogramImageSimilarity.h
+include/mirtk/HistogramMatching.h
+include/mirtk/HomogeneousTransformation.h
+include/mirtk/HomogeneousTransformationIterator.h
+include/mirtk/IOConfig.h
+include/mirtk/IOExport.h
+include/mirtk/Image.h
+include/mirtk/ImageAttributes.h
+include/mirtk/ImageConfig.h
+include/mirtk/ImageCovariance.h
+include/mirtk/ImageExport.h
+include/mirtk/ImageFunction.h
+include/mirtk/ImageGradientFunction.h
+include/mirtk/ImageGradientFunction.hxx
+include/mirtk/ImageIterator.h
+include/mirtk/ImageReader.h
+include/mirtk/ImageReaderFactory.h
+include/mirtk/ImageRegion.h
+include/mirtk/ImageSequence.h
+include/mirtk/ImageSequence.hh
+include/mirtk/ImageSimilarity.h
+include/mirtk/ImageToImage.h
+include/mirtk/ImageToInterpolationCoefficients.h
+include/mirtk/ImageTransformation.h
+include/mirtk/ImageWriter.h
+include/mirtk/ImageWriterFactory.h
+include/mirtk/Indent.h
+include/mirtk/InexactLineSearch.h
+include/mirtk/IntensityCorrelationRatioXY.h
+include/mirtk/IntensityCorrelationRatioYX.h
+include/mirtk/IntensityCrossCorrelation.h
+include/mirtk/InterpolateImageFunction.h
+include/mirtk/InterpolateImageFunction.hxx
+include/mirtk/InterpolationMode.h
+include/mirtk/InverseAffineTransformation.h
+include/mirtk/JacobianConstraint.h
+include/mirtk/JointImageEntropy.h
+include/mirtk/LabelConsistency.h
+include/mirtk/LieBracketImageFilter.h
+include/mirtk/LieBracketImageFilter2D.h
+include/mirtk/LieBracketImageFilter3D.h
+include/mirtk/LimitedMemoryBFGSDescent.h
+include/mirtk/LineSearch.h
+include/mirtk/LinearElasticityConstraint.h
+include/mirtk/LinearFreeFormTransformation3D.h
+include/mirtk/LinearFreeFormTransformation4D.h
+include/mirtk/LinearFreeFormTransformationTD.h
+include/mirtk/LinearImageGradientFunction.h
+include/mirtk/LinearImageGradientFunction.hxx
+include/mirtk/LinearImageGradientFunction2D.h
+include/mirtk/LinearImageGradientFunction2D.hxx
+include/mirtk/LinearImageGradientFunction3D.h
+include/mirtk/LinearImageGradientFunction3D.hxx
+include/mirtk/LinearInterpolateImageFunction.h
+include/mirtk/LinearInterpolateImageFunction.hxx
+include/mirtk/LinearInterpolateImageFunction2D.h
+include/mirtk/LinearInterpolateImageFunction2D.hxx
+include/mirtk/LinearInterpolateImageFunction3D.h
+include/mirtk/LinearInterpolateImageFunction3D.hxx
+include/mirtk/LinearInterpolateImageFunction4D.h
+include/mirtk/LinearInterpolateImageFunction4D.hxx
+include/mirtk/List.h
+include/mirtk/LocalOptimizer.h
+include/mirtk/LogJacobianConstraint.h
+include/mirtk/Math.h
+include/mirtk/Matlab.h
+include/mirtk/Matrix.h
+include/mirtk/Matrix3x3.h
+include/mirtk/MaxStepLineSearch.h
+include/mirtk/MeanSquaredDisplacementError.h
+include/mirtk/Memory.h
+include/mirtk/MirrorExtrapolateImageFunction.h
+include/mirtk/MultiLevelFreeFormTransformation.h
+include/mirtk/MultiLevelStationaryVelocityTransformation.h
+include/mirtk/MultiLevelTransformation.h
+include/mirtk/MultipleVoxelTransformation.h
+include/mirtk/MutualImageInformation.h
+include/mirtk/NaryVoxelFunction.h
+include/mirtk/NearestNeighborExtrapolateImageFunction.h
+include/mirtk/NearestNeighborInterpolateImageFunction.h
+include/mirtk/NearestNeighborInterpolateImageFunction.hxx
+include/mirtk/NegJacobianConstraint.h
+include/mirtk/NeighborhoodOffsets.h
+include/mirtk/NiftiImageInfo.h
+include/mirtk/NiftiImageReader.h
+include/mirtk/NiftiImageWriter.h
+include/mirtk/NormalizedGradientFieldSimilarity.h
+include/mirtk/NormalizedIntensityCrossCorrelation.h
+include/mirtk/NormalizedMutualImageInformation.h
+include/mirtk/Numeric.h
+include/mirtk/Numerics.h
+include/mirtk/NumericsConfig.h
+include/mirtk/NumericsExport.h
+include/mirtk/Object.h
+include/mirtk/ObjectFactory.h
+include/mirtk/ObjectiveFunction.h
+include/mirtk/Observable.h
+include/mirtk/Observer.h
+include/mirtk/OptimizationMethod.h
+include/mirtk/Options.h
+include/mirtk/OrderedMap.h
+include/mirtk/OrderedSet.h
+include/mirtk/PGMImageReader.h
+include/mirtk/PGMImageWriter.h
+include/mirtk/PNGImageWriter.h
+include/mirtk/Pair.h
+include/mirtk/Parallel.h
+include/mirtk/PartialAffineTransformation.h
+include/mirtk/PartialBSplineFreeFormTransformationSV.h
+include/mirtk/PartialMultiLevelStationaryVelocityTransformation.h
+include/mirtk/Path.h
+include/mirtk/PeakSignalToNoiseRatio.h
+include/mirtk/PeronaMalikErrorFunction.h
+include/mirtk/Plane.h
+include/mirtk/Point.h
+include/mirtk/PointCorrespondenceDistance.h
+include/mirtk/PointSamples.h
+include/mirtk/PointSet.h
+include/mirtk/PointSetDistance.h
+include/mirtk/PointSetDistanceMeasure.h
+include/mirtk/PointSetIO.h
+include/mirtk/Polynomial.h
+include/mirtk/PolynomialSolvers.h
+include/mirtk/PriorityQueue.h
+include/mirtk/Profiling.h
+include/mirtk/Queue.h
+include/mirtk/RadialErrorFunction.h
+include/mirtk/Random.h
+include/mirtk/RegisteredImage.h
+include/mirtk/Registration.h
+include/mirtk/RegistrationConfig.h
+include/mirtk/RegistrationEnergy.h
+include/mirtk/RegistrationExport.h
+include/mirtk/RegistrationFilter.h
+include/mirtk/RepeatExtrapolateImageFunction.h
+include/mirtk/Resampling.h
+include/mirtk/ResamplingWithPadding.h
+include/mirtk/RigidTransformation.h
+include/mirtk/ScalarFunction.h
+include/mirtk/ScalarFunctionToImage.h
+include/mirtk/ScalarGaussian.h
+include/mirtk/ScalingAndSquaring.h
+include/mirtk/SeparableConvolution.h
+include/mirtk/ShapeBasedInterpolateImageFunction.h
+include/mirtk/SimilarityMeasure.h
+include/mirtk/SimilarityTransformation.h
+include/mirtk/Sinc.h
+include/mirtk/SincInterpolateImageFunction.h
+include/mirtk/SincInterpolateImageFunction.hxx
+include/mirtk/SincInterpolateImageFunction2D.h
+include/mirtk/SincInterpolateImageFunction2D.hxx
+include/mirtk/SincInterpolateImageFunction3D.h
+include/mirtk/SincInterpolateImageFunction3D.hxx
+include/mirtk/SincInterpolateImageFunction4D.h
+include/mirtk/SincInterpolateImageFunction4D.hxx
+include/mirtk/SmoothnessConstraint.h
+include/mirtk/SparseMatrix.h
+include/mirtk/SparsityConstraint.h
+include/mirtk/SquaredErrorFunction.h
+include/mirtk/Stack.h
+include/mirtk/Status.h
+include/mirtk/StoppingCriterion.h
+include/mirtk/Stream.h
+include/mirtk/String.h
+include/mirtk/SumOfSquaredIntensityDifferences.h
+include/mirtk/SurfaceDistance.h
+include/mirtk/System.h
+include/mirtk/Terminal.h
+include/mirtk/TernaryVoxelFunction.h
+include/mirtk/TestProd.h
+include/mirtk/TopologyPreservationConstraint.h
+include/mirtk/Transformation.h
+include/mirtk/TransformationApproximationError.h
+include/mirtk/TransformationConfig.h
+include/mirtk/TransformationConstraint.h
+include/mirtk/TransformationExport.h
+include/mirtk/TransformationJacobian.h
+include/mirtk/TransformationModel.h
+include/mirtk/TransformationType.h
+include/mirtk/Transformations.h
+include/mirtk/Umfpack.h
+include/mirtk/UnaryVoxelFunction.h
+include/mirtk/UnorderedMap.h
+include/mirtk/UnorderedSet.h
+include/mirtk/Utils.h
+include/mirtk/Vector.h
+include/mirtk/Vector3.h
+include/mirtk/Vector3D.h
+include/mirtk/Vector4D.h
+include/mirtk/VectorND.h
+include/mirtk/VelocityFieldExp.h
+include/mirtk/VelocityToDisplacementField.h
+include/mirtk/VelocityToDisplacementFieldEuler.h
+include/mirtk/VelocityToDisplacementFieldSS.h
+include/mirtk/Version.h
+include/mirtk/VersionInfo.h
+include/mirtk/VolumePreservationConstraint.h
+include/mirtk/Voxel.h
+include/mirtk/VoxelCast.h
+include/mirtk/VoxelDomain.h
+include/mirtk/VoxelFunction.h
+include/mirtk/Vtk.h
+include/mirtk/VtkMath.h
+lib/cmake/mirtk/MIRTKApplicationsConfig.cmake
+lib/cmake/mirtk/MIRTKApplicationsUse.cmake
+lib/cmake/mirtk/MIRTKCommonConfig.cmake
+lib/cmake/mirtk/MIRTKCommonUse.cmake
+lib/cmake/mirtk/MIRTKConfig.cmake
+lib/cmake/mirtk/MIRTKConfigVersion.cmake
+lib/cmake/mirtk/MIRTKCustomTargets.cmake
+lib/cmake/mirtk/MIRTKIOConfig.cmake
+lib/cmake/mirtk/MIRTKIOUse.cmake
+lib/cmake/mirtk/MIRTKImageConfig.cmake
+lib/cmake/mirtk/MIRTKImageUse.cmake
+lib/cmake/mirtk/MIRTKInstallManifest.txt
+lib/cmake/mirtk/MIRTKNumericsConfig.cmake
+lib/cmake/mirtk/MIRTKNumericsUse.cmake
+lib/cmake/mirtk/MIRTKRegistrationConfig.cmake
+lib/cmake/mirtk/MIRTKRegistrationUse.cmake
+lib/cmake/mirtk/MIRTKTargets-%%CMAKE_BUILD_TYPE%%.cmake
+lib/cmake/mirtk/MIRTKTargets.cmake
+lib/cmake/mirtk/MIRTKTransformationConfig.cmake
+lib/cmake/mirtk/MIRTKTransformationUse.cmake
+lib/cmake/mirtk/MIRTKUninstall.cmake
+lib/cmake/mirtk/MIRTKUse.cmake
+lib/mirtk/libMIRTKCommon.so
+lib/mirtk/libMIRTKCommon.so.0
+lib/mirtk/libMIRTKCommon.so.0.0.0
+lib/mirtk/libMIRTKIO.so
+lib/mirtk/libMIRTKIO.so.0
+lib/mirtk/libMIRTKIO.so.0.0.0
+lib/mirtk/libMIRTKImage.so
+lib/mirtk/libMIRTKImage.so.0
+lib/mirtk/libMIRTKImage.so.0.0.0
+lib/mirtk/libMIRTKNumerics.so
+lib/mirtk/libMIRTKNumerics.so.0
+lib/mirtk/libMIRTKNumerics.so.0.0.0
+lib/mirtk/libMIRTKRegistration.so
+lib/mirtk/libMIRTKRegistration.so.0
+lib/mirtk/libMIRTKRegistration.so.0.0.0
+lib/mirtk/libMIRTKTransformation.so
+lib/mirtk/libMIRTKTransformation.so.0
+lib/mirtk/libMIRTKTransformation.so.0.0.0
+lib/mirtk/python/mirtk/__init__.py
+lib/mirtk/python/mirtk/atlas/__init__.py
+lib/mirtk/python/mirtk/atlas/spatiotemporal.py
+lib/mirtk/python/mirtk/batch/__init__.py
+lib/mirtk/python/mirtk/batch/condor.py
+lib/mirtk/python/mirtk/batch/slurm.py
+lib/mirtk/python/mirtk/subprocess.py
+lib/mirtk/python/mirtk/utils.py
+lib/mirtk/tools/aggregate-images
+lib/mirtk/tools/average-dofs
+lib/mirtk/tools/average-images
+lib/mirtk/tools/average-measure
+lib/mirtk/tools/average-overlap
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