Date: Fri, 24 Feb 2023 23:31:47 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 1993bfc7cf7d - main - biology/samtools: Update to 1.17 Message-ID: <202302242331.31ONVlF3059438@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=1993bfc7cf7d933c1a8cc11bf2198ce8691a0d76 commit 1993bfc7cf7d933c1a8cc11bf2198ce8691a0d76 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2023-02-24 23:27:21 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2023-02-24 23:27:21 +0000 biology/samtools: Update to 1.17 Numerous enhancements and bug fixes Changes: https://github.com/samtools/samtools/releases Reported by: portscout --- biology/samtools/Makefile | 2 +- biology/samtools/distinfo | 6 +++--- biology/samtools/pkg-plist | 2 ++ 3 files changed, 6 insertions(+), 4 deletions(-) diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile index 64b06bff07e8..92da7c61eff7 100644 --- a/biology/samtools/Makefile +++ b/biology/samtools/Makefile @@ -1,5 +1,5 @@ PORTNAME= samtools -DISTVERSION= 1.16.1 +DISTVERSION= 1.17 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/samtools/distinfo b/biology/samtools/distinfo index d0c7b4cbb765..55c01a4de639 100644 --- a/biology/samtools/distinfo +++ b/biology/samtools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1672094602 -SHA256 (samtools-samtools-1.16.1_GH0.tar.gz) = 70a7f358088929272d8c22d6063290ac8420f5351fba237a99fe17851a45d8be -SIZE (samtools-samtools-1.16.1_GH0.tar.gz) = 4992787 +TIMESTAMP = 1677245969 +SHA256 (samtools-samtools-1.17_GH0.tar.gz) = f76ec1880468ecaa5341a7256ae896f2cfb191193dbb683046776fb81e18af49 +SIZE (samtools-samtools-1.17_GH0.tar.gz) = 5459752 diff --git a/biology/samtools/pkg-plist b/biology/samtools/pkg-plist index 1d228254f042..15e146e410cd 100644 --- a/biology/samtools/pkg-plist +++ b/biology/samtools/pkg-plist @@ -29,6 +29,7 @@ man/man1/samtools-cat.1.gz man/man1/samtools-collate.1.gz man/man1/samtools-consensus.1.gz man/man1/samtools-coverage.1.gz +man/man1/samtools-cram-size.1.gz man/man1/samtools-depad.1.gz man/man1/samtools-depth.1.gz man/man1/samtools-dict.1.gz @@ -50,6 +51,7 @@ man/man1/samtools-phase.1.gz man/man1/samtools-quickcheck.1.gz man/man1/samtools-reference.1.gz man/man1/samtools-reheader.1.gz +man/man1/samtools-reset.1.gz man/man1/samtools-rmdup.1.gz man/man1/samtools-samples.1.gz man/man1/samtools-sort.1.gz
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