Date: Tue, 03 Feb 2026 15:13:46 +0000 From: Thierry Thomas <thierry@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 24f85cb9f5e7 - main - science/elmerfem: restore Message-ID: <698210aa.4074d.7be5b9d0@gitrepo.freebsd.org>
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The branch main has been updated by thierry: URL: https://cgit.FreeBSD.org/ports/commit/?id=24f85cb9f5e7c294e44a1b70f4da13bf1111402f commit 24f85cb9f5e7c294e44a1b70f4da13bf1111402f Author: Thierry Thomas <thierry@FreeBSD.org> AuthorDate: 2026-02-03 15:09:06 +0000 Commit: Thierry Thomas <thierry@FreeBSD.org> CommitDate: 2026-02-03 15:09:06 +0000 science/elmerfem: restore --- MOVED | 1 - science/Makefile | 1 + science/elmerfem/Makefile | 123 ++++++ science/elmerfem/distinfo | 5 + science/elmerfem/files/patch-CMakeLists.txt | 11 + .../patch-ElmerGUI_Application_cad_cadview.cpp | 101 +++++ .../patch-ElmerGUI_Application_twod_renderarea.cpp | 10 + .../patch-ElmerGUI_Application_vtkpost_vtkpost.cpp | 53 +++ .../elmerfem/files/patch-ElmerGUI_CMakeLists.txt | 15 + .../files/patch-cmake_Modules_FindOCE.cmake | 15 + ...ake_Modules_FindPackageHandleStandardArgs.cmake | 10 + .../files/patch-elmergrid_src_CMakeLists.txt | 22 + .../patch-fem_src_modules_DCRComplexSolve.F90 | 58 +++ science/elmerfem/pkg-descr | 8 + science/elmerfem/pkg-plist | 449 +++++++++++++++++++++ 15 files changed, 881 insertions(+), 1 deletion(-) diff --git a/MOVED b/MOVED index 4757d7fc75ec..52d678478277 100644 --- a/MOVED +++ b/MOVED @@ -5104,5 +5104,4 @@ biology/snpeff||2026-02-01|Has expired: Unfetchable games/freeminer-default||2026-02-01|Has expired: depends on deprecated games/freeminer games/freeminer||2026-02-01|Has expired: dead upstream net/jsch||2026-02-01|Has expired: Upstream website does not exist. No ports depend on this. It does not compile on jdk21. See also: https://github.com/mwiede/jsch -science/elmerfem||2026-02-01|Broken for more than 6 months devel/rubygem-ffi16|devel/rubygem-ffi|2026-02-03|Remove obsoleted port. Use devel/rubygem-ffi instead diff --git a/science/Makefile b/science/Makefile index fefb467d96f3..f14398a64291 100644 --- a/science/Makefile +++ b/science/Makefile @@ -83,6 +83,7 @@ SUBDIR += dynare SUBDIR += eccodes SUBDIR += elk + SUBDIR += elmerfem SUBDIR += epte SUBDIR += erd SUBDIR += ergo diff --git a/science/elmerfem/Makefile b/science/elmerfem/Makefile new file mode 100644 index 000000000000..0b9f373882f1 --- /dev/null +++ b/science/elmerfem/Makefile @@ -0,0 +1,123 @@ +PORTNAME= elmerfem +DISTVERSIONPREFIX= release- +DISTVERSION= 9.0 +PORTREVISION= 23 +CATEGORIES= science + +PATCH_SITES= https://github.com/ElmerCSC/${PORTNAME}/commit/ +PATCHFILES= 48e9430c.patch:-p1 # https://github.com/ElmerCSC/elmerfem/pull/294 + +MAINTAINER= henrik@gulbra.net +COMMENT= Multiphysical simulation software +WWW= https://www.elmerfem.org/blog/ + +LICENSE= GPLv2 + +BROKEN= fails to build with vtk-9.5.0, see https://github.com/ElmerCSC/elmerfem/issues/677 + +LIB_DEPENDS= libblas.so:math/blas \ + libhdf5.so:science/hdf5 \ + libmetis.so:math/metis \ + libmpich.so:net/mpich \ + libnetcdf.so:science/netcdf \ + libopenblas.so:math/openblas \ + libparpack.so:math/arpack-ng + +USES= cmake compiler:c++11-lang fortran +USE_CXXSTD= c++14 +USE_GITHUB= yes +GH_ACCOUNT= ElmerCSC +USE_LDCONFIG= ${PREFIX}/lib/elmersolver + +CMAKE_ARGS= -DELMER_FEM_REVISION:STRING=${GH_TAGNAME} + +ALL_TARGET= # empty + +LDFLAGS+= -L${LOCALBASE}/lib + +PORTSCOUT= limit:^release-[1-9] + +CMAKE_ARGS+= -DHAVE_INTTYPES_H=ON +.if !defined(MAINTAINER_MODE) +CMAKE_ARGS+= -Wno-dev +.endif + +OPTIONS_DEFINE= GUI OCC +OPTIONS_DEFAULT= GUI OCC +OPTIONS_SUB= yes + +GUI_DESC= Build with ElmerGUI (Graphical User Interface) +OCC_DESC= Use OpenCASCADE for CAD import in ElmerGUI + +GUI_LIB_DEPENDS= libqwt.so:x11-toolkits/qwt6@qt5 +GUI_USES= gl jpeg qt:5 xorg +GUI_USE= gl=gl,glu xorg=ice,sm,x11,xext,xt qt=${_QT5_LIBS:ts,} +GUI_CMAKE_BOOL= WITH_ELMERGUI WITH_PARAVIEW +GUI_CMAKE_ON= -DQWT_LIBRARY=${QT_LIBDIR}/libqwt.so \ + -DQWT_INCLUDE_DIR=${QT_INCDIR}/qwt6 \ + -DDESIRED_QT_VERSION=5 \ + -DWITH_QT5:BOOL=TRUE \ + -DQT_FOUND:BOOL=TRUE + +OCC_IMPLIES= GUI +OCC_LIB_DEPENDS= libexpat.so:textproc/expat2 \ + libfreetype.so:print/freetype2 \ + libpng.so:graphics/png \ + libpython${_PYVERSION}.so:lang/python${PYTHON_SUFFIX} \ + libtiff.so:graphics/tiff \ + libTKernel.so:cad/opencascade \ + libvtksys-${VTK_VER}.so:math/vtk${VTK_VER:R} +OCC_USES= python +OCC_CMAKE_BOOL= WITH_OCC +OCC_CMAKE_ON= -DVTK_DIR=${LOCALBASE}/lib/cmake/vtk-9.0 \ + -DPython3_EXECUTABLE=${PYTHON_CMD} + +_LIBSTAGEDIR= ${STAGEDIR}/${PREFIX}/lib/elmersolver +_PYVERSION= ${PYTHON_VER}${PYTHON_ABIVER} +_QT5_LIBS= buildtools:build core declarative gui network opengl \ + printsupport qmake:build script sql svg widgets xml + +.include <../../math/vtk9/Makefile.version> +.include <bsd.port.pre.mk> + +.if ${ARCH} == "amd64" +CFLAGS_${ARCH}= -fPIC +CXXFLAGS_${ARCH}= -fPIC +FCFLAGS+= -fPIC +FFLAGS+= -fPIC +.endif + +.if ${GCC_DEFAULT} >= 10 +# workaround for Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/COMPLEX(8)). +# in theory, this should set FCFLAGS, but the port does not conform +FFLAGS+= -fallow-argument-mismatch +.endif + +post-patch: + @${RM} ${WRKSRC}/cmake/Modules/CMakeParseArguments.cmake + @${RM} -r ${WRKSRC}/elmergrid/src/metis-5.1.0 + @${REINPLACE_CMD} -e 's,"metis.*/metis\.h",<metis.h>,' \ + ${WRKSRC}/elmergrid/src/egparallel.c + +pre-configure-OCC-on: + ${REINPLACE_CMD} -e "s|\$${VERSION}|`${PKG_QUERY} '%v' opencascade`|" \ + "${WRKSRC}/cmake/Modules/FindOCE.cmake" + ${REINPLACE_CMD} -e 's|$${INCLUDE}|${LOCALBASE}/include/OpenCASCADE|' \ + "${WRKSRC}/cmake/Modules/FindOCE.cmake" + +post-configure: + # workaround for https://github.com/ElmerCSC/elmerfem/issues/334 + @${REINPLACE_CMD} -e 's| -lMPI::MPI_C | |' ${BUILD_WRKSRC}/ElmerGUI/Application/CMakeFiles/ElmerGUI.dir/link.txt + +post-install: + ${LN} -sf ElmerSolver_mpi ${STAGEDIR}${PREFIX}/bin/ElmerSolver + ${LN} -sf libelmersolver.so ${_LIBSTAGEDIR}/libelmersolver.so.0 + ${LN} -sf libfhuti.so ${_LIBSTAGEDIR}/libfhuti.so.0 + ${LN} -sf libmatc.so ${_LIBSTAGEDIR}/libmatc.so.0 + ${LN} -sf libmpi_stubs.so ${_LIBSTAGEDIR}/libmpi_stubs.so.0 + @${STRIP_CMD} ${STAGEDIR}/${PREFIX}/bin/ElmerGrid + +do-test: + @cd ${TEST_WRKSRC} && ctest -C ${CMAKE_BUILD_TYPE} ${_MAKE_JOBS} + +.include <bsd.port.post.mk> diff --git a/science/elmerfem/distinfo b/science/elmerfem/distinfo new file mode 100644 index 000000000000..a586a9e01226 --- /dev/null +++ b/science/elmerfem/distinfo @@ -0,0 +1,5 @@ +TIMESTAMP = 1648098229 +SHA256 (ElmerCSC-elmerfem-release-9.0_GH0.tar.gz) = 08c5bf261e87ff37456c1aa0372db3c83efabe4473ea3ea0b8ec66f5944d1aa0 +SIZE (ElmerCSC-elmerfem-release-9.0_GH0.tar.gz) = 64060003 +SHA256 (48e9430c.patch) = b6ed988029169a5af745187d6ffb3e73cb81f5287944aab273e4a1fdf50af91f +SIZE (48e9430c.patch) = 1141 diff --git a/science/elmerfem/files/patch-CMakeLists.txt b/science/elmerfem/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..f663733e4c7b --- /dev/null +++ b/science/elmerfem/files/patch-CMakeLists.txt @@ -0,0 +1,11 @@ +--- CMakeLists.txt.orig 2020-06-26 12:18:06 UTC ++++ CMakeLists.txt +@@ -470,7 +470,7 @@ ADD_SUBDIRECTORY(umfpack) + ADD_SUBDIRECTORY(fhutiter) + ADD_SUBDIRECTORY(meshgen2d) + ADD_SUBDIRECTORY(fem) +-ADD_SUBDIRECTORY(mathlibs) ++#ADD_SUBDIRECTORY(mathlibs) + ADD_SUBDIRECTORY(elmergrid) + ADD_SUBDIRECTORY(license_texts) + diff --git a/science/elmerfem/files/patch-ElmerGUI_Application_cad_cadview.cpp b/science/elmerfem/files/patch-ElmerGUI_Application_cad_cadview.cpp new file mode 100644 index 000000000000..aed35f60ceed --- /dev/null +++ b/science/elmerfem/files/patch-ElmerGUI_Application_cad_cadview.cpp @@ -0,0 +1,101 @@ +- includes workaround for https://github.com/ElmerCSC/elmerfem/issues/304 + +--- ElmerGUI/Application/cad/cadview.cpp.orig 2020-11-10 19:52:44 UTC ++++ ElmerGUI/Application/cad/cadview.cpp +@@ -74,7 +74,7 @@ + #include <BRepAdaptor_Curve2d.hxx> + #include <BRepBndLib.hxx> + #include <BRepGProp.hxx> +-#include <BRepMesh.hxx> ++#include <BRepMesh_IncrementalMesh.hxx> + #include <BRepTools.hxx> + #include <BRep_Builder.hxx> + #include <BRep_Tool.hxx> +@@ -104,7 +104,7 @@ static void pickEventHandler(vtkObject* caller, unsign + QVTKWidget* qvtkWidget = cadView->GetQVTKWidget(); + #endif + +- vtkAbstractPicker* picker = qvtkWidget->GetInteractor()->GetPicker(); ++ vtkAbstractPicker* picker = qvtkWidget->interactor()->GetPicker(); + vtkPropPicker* propPicker = vtkPropPicker::SafeDownCast(picker); + vtkActor* actor = propPicker->GetActor(); + +@@ -146,15 +146,15 @@ CadView::CadView(QWidget *parent) : QMainWindow(parent + + renderer = vtkRenderer::New(); + renderer->SetBackground(1, 1, 1); +- qVTKWidget->GetRenderWindow()->AddRenderer(renderer); ++ qVTKWidget->renderWindow()->AddRenderer(renderer); + renderer->GetRenderWindow()->Render(); + + vtkPropPicker *propPicker = vtkPropPicker::New(); + vtkCallbackCommand *cbcPick = vtkCallbackCommand::New(); +- qVTKWidget->GetInteractor()->SetPicker(propPicker); ++ qVTKWidget->interactor()->SetPicker(propPicker); + cbcPick->SetClientData(this); + cbcPick->SetCallback(pickEventHandler); +- qVTKWidget->GetInteractor()->GetPicker()->AddObserver(vtkCommand::PickEvent, ++ qVTKWidget->interactor()->GetPicker()->AddObserver(vtkCommand::PickEvent, + cbcPick); + propPicker->Delete(); + cbcPick->Delete(); +@@ -343,9 +343,6 @@ bool CadView::readFile(QString fileName) { + + const gp_Trsf &Transformation = Location.Transformation(); + +- const Poly_Array1OfTriangle &Triangles = Triangulation->Triangles(); +- const TColgp_Array1OfPnt &Nodes = Triangulation->Nodes(); +- + int nofTriangles = Triangulation->NbTriangles(); + int nofNodes = Triangulation->NbNodes(); + +@@ -366,8 +363,8 @@ bool CadView::readFile(QString fileName) { + vtkTriangle *triangle = vtkTriangle::New(); + partGrid->Allocate(nofTriangles, nofTriangles); + +- for (int i = Triangles.Lower(); i <= Triangles.Upper(); i++) { +- Triangles(i).Get(n0, n1, n2); ++ for (int i = 1; i <= nofTriangles; i++) { ++ Triangulation->Triangle(i).Get(n0, n1, n2); + + if (Face.Orientation() != TopAbs_FORWARD) { + int tmp = n2; +@@ -375,9 +372,9 @@ bool CadView::readFile(QString fileName) { + n1 = tmp; + } + +- triangle->GetPointIds()->SetId(0, n0 - Nodes.Lower()); +- triangle->GetPointIds()->SetId(1, n1 - Nodes.Lower()); +- triangle->GetPointIds()->SetId(2, n2 - Nodes.Lower()); ++ triangle->GetPointIds()->SetId(0, n0 - 1); ++ triangle->GetPointIds()->SetId(1, n1 - 1); ++ triangle->GetPointIds()->SetId(2, n2 - 1); + + partGrid->InsertNextCell(triangle->GetCellType(), + triangle->GetPointIds()); +@@ -385,13 +382,13 @@ bool CadView::readFile(QString fileName) { + + double x[3]; + vtkPoints *partPoints = vtkPoints::New(); +- for (int i = Nodes.Lower(); i <= Nodes.Upper(); i++) { +- gp_XYZ XYZ = Nodes(i).Coord(); ++ for (int i = 1; i <= nofNodes; i++) { ++ gp_XYZ XYZ = Triangulation->Node(i).Coord(); + Transformation.Transforms(XYZ); + x[0] = XYZ.X(); + x[1] = XYZ.Y(); + x[2] = XYZ.Z(); +- partPoints->InsertPoint(i - Nodes.Lower(), x); ++ partPoints->InsertPoint(i - 1, x); + } + + partGrid->SetPoints(partPoints); +@@ -490,7 +487,7 @@ bool CadView::readFile(QString fileName) { + // Draw: + //------ + renderer->ResetCamera(); +- qVTKWidget->GetRenderWindow()->Render(); ++ qVTKWidget->renderWindow()->Render(); + + QCoreApplication::processEvents(); + diff --git a/science/elmerfem/files/patch-ElmerGUI_Application_twod_renderarea.cpp b/science/elmerfem/files/patch-ElmerGUI_Application_twod_renderarea.cpp new file mode 100644 index 000000000000..804d181d2e71 --- /dev/null +++ b/science/elmerfem/files/patch-ElmerGUI_Application_twod_renderarea.cpp @@ -0,0 +1,10 @@ +--- ElmerGUI/Application/twod/renderarea.cpp.orig 2020-06-23 12:25:41 UTC ++++ ElmerGUI/Application/twod/renderarea.cpp +@@ -38,6 +38,7 @@ + * * + *****************************************************************************/ + #include <QPainter> ++#include <QPainterPath> + #include <QMouseEvent> + #include <QFile> + #include <QTextStream> diff --git a/science/elmerfem/files/patch-ElmerGUI_Application_vtkpost_vtkpost.cpp b/science/elmerfem/files/patch-ElmerGUI_Application_vtkpost_vtkpost.cpp new file mode 100644 index 000000000000..77962f421b0e --- /dev/null +++ b/science/elmerfem/files/patch-ElmerGUI_Application_vtkpost_vtkpost.cpp @@ -0,0 +1,53 @@ +--- ElmerGUI/Application/vtkpost/vtkpost.cpp.orig 2020-11-10 19:52:44 UTC ++++ ElmerGUI/Application/vtkpost/vtkpost.cpp +@@ -124,6 +124,8 @@ + + using namespace std; + ++#define GetRenderWindow renderWindow // renaming for VTK-9.2.2 ++ + // Custom print for QtScript: + //---------------------------- + #if QT_VERSION >= 0x040403 +@@ -171,7 +173,7 @@ static void pEventHandler(vtkObject* caller, unsigned + QVTKWidget* qvtkWidget = vtkPost->GetQVTKWidget(); + #endif + +- vtkAbstractPicker* picker = qvtkWidget->GetInteractor()->GetPicker(); ++ vtkAbstractPicker* picker = qvtkWidget->interactor()->GetPicker(); + vtkPropPicker* propPicker = vtkPropPicker::SafeDownCast(picker); + + vtkActor* actor = propPicker->GetActor(); +@@ -382,14 +384,14 @@ VtkPost::VtkPost(QWidget *parent) + // Create a cell picker and set the callback & observer: + //------------------------------------------------------ + vtkPropPicker* propPicker = vtkPropPicker::New(); +- qvtkWidget->GetInteractor()->SetPicker(propPicker); ++ qvtkWidget->interactor()->SetPicker(propPicker); + propPicker->Delete(); + + vtkCallbackCommand* cbcPick = vtkCallbackCommand::New(); + cbcPick->SetClientData(this); + cbcPick->SetCallback(pEventHandler); + +- vtkAbstractPicker* picker = qvtkWidget->GetInteractor()->GetPicker(); ++ vtkAbstractPicker* picker = qvtkWidget->interactor()->GetPicker(); + picker->AddObserver(vtkCommand::EndPickEvent, cbcPick); + cbcPick->Delete(); + +@@ -402,7 +404,7 @@ VtkPost::VtkPost(QWidget *parent) + cbcPlane->SetCallback(iEventHandler); + + planeWidget = vtkImplicitPlaneWidget::New(); +- planeWidget->SetInteractor(qvtkWidget->GetInteractor()); ++ planeWidget->SetInteractor(qvtkWidget->interactor()); + planeWidget->AddObserver(vtkCommand::InteractionEvent, cbcPlane); + cbcPlane->Delete(); + +@@ -3519,4 +3521,4 @@ void VtkPost::viewZXmPlaneSlot(){ + renderer->GetActiveCamera()->SetViewUp(1,0,0); + renderer->ResetCamera(); + redrawSlot(); +-} +\ No newline at end of file ++} diff --git a/science/elmerfem/files/patch-ElmerGUI_CMakeLists.txt b/science/elmerfem/files/patch-ElmerGUI_CMakeLists.txt new file mode 100644 index 000000000000..1207457d52e1 --- /dev/null +++ b/science/elmerfem/files/patch-ElmerGUI_CMakeLists.txt @@ -0,0 +1,15 @@ +--- ElmerGUI/CMakeLists.txt.orig 2020-11-10 19:52:44 UTC ++++ ElmerGUI/CMakeLists.txt +@@ -83,7 +83,11 @@ IF(WITH_OCC) + MESSAGE(STATUS " [ElmerGUI] OCE_VERSION: " ${OCE_VERSION}) + MESSAGE(STATUS " [ElmerGUI] OCE_INCLUDE_DIRS: " ${OCE_INCLUDE_DIRS}) + ENDIF() +- SET(ELMER_OCC_LIBS "TKernel;TKMath;TKG3d;TKG2d;TKBRep;TKSTEP;TKMesh;TKIGES;TKG2d;TKGeomBase;TKBool;TKBO;TKGeomAlgo;TKPrim;TKShHealing;TKSTEP209;TKSTEPAttr;TKSTEPBase;TKTopAlgo;TKXSBase" CACHE INTERNAL "") ++ IF(OCE_VERSION AND OCE_VERSION VERSION_GREATER_EQUAL "7.8.0") ++ SET(ELMER_OCC_LIBS "TKernel;TKMath;TKG3d;TKG2d;TKBRep;TKDESTEP;TKMesh;TKDEIGES;TKG2d;TKGeomBase;TKBool;TKBO;TKGeomAlgo;TKPrim;TKShHealing;TKTopAlgo;TKXSBase" CACHE INTERNAL "") ++ ELSE() ++ SET(ELMER_OCC_LIBS "TKernel;TKMath;TKG3d;TKG2d;TKBRep;TKSTEP;TKMesh;TKIGES;TKG2d;TKGeomBase;TKBool;TKBO;TKGeomAlgo;TKPrim;TKShHealing;TKSTEP209;TKSTEPAttr;TKSTEPBase;TKTopAlgo;TKXSBase" CACHE INTERNAL "") ++ ENDIF() + MESSAGE(STATUS " [ElmerGUI] ELMER_OCC_LIBS: " "${ELMER_OCC_LIBS}") + MESSAGE(STATUS "------------------------------------------------") + ENDIF() diff --git a/science/elmerfem/files/patch-cmake_Modules_FindOCE.cmake b/science/elmerfem/files/patch-cmake_Modules_FindOCE.cmake new file mode 100644 index 000000000000..c9c428cd8de4 --- /dev/null +++ b/science/elmerfem/files/patch-cmake_Modules_FindOCE.cmake @@ -0,0 +1,15 @@ +--- cmake/Modules/FindOCE.cmake.orig 2020-03-08 13:46:44 UTC ++++ cmake/Modules/FindOCE.cmake +@@ -0,0 +1,12 @@ ++MESSAGE(STATUS "Faking OCE") ++ ++SET(OCE_FOUND TRUE) ++SET(OCE_VERSION "${VERSION}") ++SET(OCE_INCLUDE_DIRS "${INCLUDE}") ++ ++ ++MARK_AS_ADVANCED( ++ OCE_FOUND ++ OCE_VERSION ++ OCE_INCLUDE_DIRS ++ ) diff --git a/science/elmerfem/files/patch-cmake_Modules_FindPackageHandleStandardArgs.cmake b/science/elmerfem/files/patch-cmake_Modules_FindPackageHandleStandardArgs.cmake new file mode 100644 index 000000000000..68963493b696 --- /dev/null +++ b/science/elmerfem/files/patch-cmake_Modules_FindPackageHandleStandardArgs.cmake @@ -0,0 +1,10 @@ +--- cmake/Modules/FindPackageHandleStandardArgs.cmake.orig 2020-11-10 19:52:44 UTC ++++ cmake/Modules/FindPackageHandleStandardArgs.cmake +@@ -100,7 +100,6 @@ + # License text for the above reference.) + + include(${CMAKE_CURRENT_LIST_DIR}/FindPackageMessage.cmake) +-include(${CMAKE_CURRENT_LIST_DIR}/CMakeParseArguments.cmake) + + # internal helper macro + macro(_FPHSA_FAILURE_MESSAGE _msg) diff --git a/science/elmerfem/files/patch-elmergrid_src_CMakeLists.txt b/science/elmerfem/files/patch-elmergrid_src_CMakeLists.txt new file mode 100644 index 000000000000..8daab05b04f0 --- /dev/null +++ b/science/elmerfem/files/patch-elmergrid_src_CMakeLists.txt @@ -0,0 +1,22 @@ +--- elmergrid/src/CMakeLists.txt.orig 2020-11-10 19:52:44 UTC ++++ elmergrid/src/CMakeLists.txt +@@ -12,19 +12,13 @@ IF(CMAKE_CROSSCOMPILING) + ENDIF() + ENDIF() + +-# Don't install metis +-SET(METIS_INSTALL FALSE CACHE BOOL "") +-ADD_SUBDIRECTORY(metis-5.1.0) +- + SET(elmergrid_SRCS egdef.h egparallel.h egnative.h egconvert.h + egexport.h egextra.h egmesh.h + egtypes.h egutils.h egparallel.c egnative.c egconvert.c egexport.c + egextra.c egmesh.c fempre.c + egutils.c) + +-INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/metis) + INCLUDE_DIRECTORIES(${CMAKE_CURRENT_BINARY_DIR}) +-INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR}/elmergrid/src/metis) + INCLUDE_DIRECTORIES(${CMAKE_BINARY_DIR}/elmergrid/src) + + ADD_DEFINITIONS(-DDISABLE_MATC) diff --git a/science/elmerfem/files/patch-fem_src_modules_DCRComplexSolve.F90 b/science/elmerfem/files/patch-fem_src_modules_DCRComplexSolve.F90 new file mode 100644 index 000000000000..515d7d578f3e --- /dev/null +++ b/science/elmerfem/files/patch-fem_src_modules_DCRComplexSolve.F90 @@ -0,0 +1,58 @@ +--- fem/src/modules/DCRComplexSolve.F90.orig 2020-11-10 19:52:44 UTC ++++ fem/src/modules/DCRComplexSolve.F90 +@@ -433,6 +433,7 @@ CONTAINS + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -485,6 +486,7 @@ CONTAINS + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -1074,6 +1076,7 @@ contains + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -1374,6 +1377,7 @@ contains + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -1426,6 +1430,7 @@ contains + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -1727,6 +1732,7 @@ CONTAINS + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ +@@ -1779,6 +1785,7 @@ CONTAINS + !------------------------------------------------------------------------------ + LOGICAL :: FirstTime = .TRUE., stat + REAL(KIND=dp), POINTER :: Hwrk(:,:,:) ++ INTEGER :: i + + SAVE FirstTime, Hwrk + !------------------------------------------------------------------------------ diff --git a/science/elmerfem/pkg-descr b/science/elmerfem/pkg-descr new file mode 100644 index 000000000000..cb5c79f9f2de --- /dev/null +++ b/science/elmerfem/pkg-descr @@ -0,0 +1,8 @@ +Elmer runs multiphysical simulations, using the finite element method +to solve predefined or user-specified partial differential equations. +There are models for structural mechanics, fluid dynamics, acoustics, +heat transfer, and electromagnetism in both two and three dimensions. +New solvers can be added as separate modules linked into the program. + +While Elmer is powerful, it is not for the faint of heart. New users +can expect to spend days or weeks honing their skills in one domain. diff --git a/science/elmerfem/pkg-plist b/science/elmerfem/pkg-plist new file mode 100644 index 000000000000..a0a7c03ac32b --- /dev/null +++ b/science/elmerfem/pkg-plist @@ -0,0 +1,449 @@ +%%GUI%%bin/ElmerGUI +bin/ElmerGrid +bin/ElmerSolver +bin/ElmerSolver_mpi +bin/GebhardtFactors +bin/Mesh2D +bin/ViewFactors +bin/elmerf90 +bin/elmerld +bin/matc +%%GUI%%lib/ElmerGUI/ngcore/libng.a +lib/elmersolver/libamd.a +lib/elmersolver/libamdf77.a +lib/elmersolver/libelmersolver.so +lib/elmersolver/libelmersolver.so.0 +lib/elmersolver/libfhuti.so +lib/elmersolver/libfhuti.so.0 +lib/elmersolver/libmatc.so +lib/elmersolver/libmatc.so.0 +lib/elmersolver/libmpi_stubs.so +lib/elmersolver/libmpi_stubs.so.0 +lib/elmersolver/libumfpack.a +%%GUI%%share/ElmerGUI/edf-extra/advection-diffusion.xml +%%GUI%%share/ElmerGUI/edf-extra/divergencesolver.xml +%%GUI%%share/ElmerGUI/edf-extra/elasticplate.xml 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