Date: Sun, 22 Mar 2026 05:38:17 +0000 From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 3df34657df9a - main - science/libcifpp: update 7.0.8=?utf-8?Q? =E2=86=92 10.?=0.0 Message-ID: <69bf8049.32ca4.31b308bb@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=3df34657df9aefcc83c8b196a191d6a9905dad6a commit 3df34657df9aefcc83c8b196a191d6a9905dad6a Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2026-03-22 05:07:48 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2026-03-22 05:38:12 +0000 science/libcifpp: update 7.0.8 → 10.0.0 --- science/libcifpp/Makefile | 12 ++++--- science/libcifpp/distinfo | 10 +++--- science/libcifpp/files/patch-CMakeLists.txt | 52 ++++++++++++++--------------- science/libcifpp/pkg-plist | 10 ++---- 4 files changed, 41 insertions(+), 43 deletions(-) diff --git a/science/libcifpp/Makefile b/science/libcifpp/Makefile index 96e945f88975..694f22f97de5 100644 --- a/science/libcifpp/Makefile +++ b/science/libcifpp/Makefile @@ -1,7 +1,6 @@ PORTNAME= libcifpp DISTVERSIONPREFIX= v -DISTVERSION= 7.0.8 -PORTREVISION= 3 +DISTVERSION= 10.0.0 CATEGORIES= science MASTER_SITES= https://files.wwpdb.org/pub/pdb/data/monomers/:components DISTFILES= components.cif.gz:components @@ -15,11 +14,13 @@ WWW= https://github.com/PDB-REDO/libcifpp LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE -BUILD_DEPENDS= catch>0:devel/catch -LIB_DEPENDS= libboost_iostreams.so:devel/boost-libs +BUILD_DEPENDS= catch>0:devel/catch \ + fast_float>0:math/fast_float +LIB_DEPENDS= libboost_iostreams.so:devel/boost-libs \ + libpcre2-8.so:devel/pcre2 RUN_DEPENDS= bash:shells/bash -USES= cmake:testing compiler:c++20-lang eigen:3 shebangfix +USES= cmake:testing compiler:c++20-lang eigen:3 pkgconfig shebangfix sqlite USE_LDCONFIG= yes USE_GITHUB= yes @@ -28,6 +29,7 @@ GH_ACCOUNT= PDB-REDO SHEBANG_FILES= tools/update-libcifpp-data.in CMAKE_ON= BUILD_SHARED_LIBS +CMAKE_OFF= BUILD_TESTING CMAKE_ARGS= -DDISTDIR_FULL=${DISTDIR}/${DIST_SUBDIR} CMAKE_TESTING_ON= ENABLE_TESTING diff --git a/science/libcifpp/distinfo b/science/libcifpp/distinfo index 36ccc806dc44..6c41c66255c3 100644 --- a/science/libcifpp/distinfo +++ b/science/libcifpp/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1736722754 -SHA256 (libcifpp-7.0.8/components.cif.gz) = 6c5174e7fdc80bdba9ebba72ae789ad5ca9f47b6885d5f6936c2656eff351847 -SIZE (libcifpp-7.0.8/components.cif.gz) = 104745353 -SHA256 (libcifpp-7.0.8/PDB-REDO-libcifpp-v7.0.8_GH0.tar.gz) = 2297e6649a4f71caf9da5f1d97f59512e7324bb62083bb5b08eb00c1c0385cb3 -SIZE (libcifpp-7.0.8/PDB-REDO-libcifpp-v7.0.8_GH0.tar.gz) = 2648244 +TIMESTAMP = 1774152097 +SHA256 (libcifpp-10.0.0/components.cif.gz) = dd4396e48d09d57a5840589517259208c9fb777c303902c40d44459685eec97e +SIZE (libcifpp-10.0.0/components.cif.gz) = 114892799 +SHA256 (libcifpp-10.0.0/PDB-REDO-libcifpp-v10.0.0_GH0.tar.gz) = f556fcf5fd4a5728c1fd6c67976cdeed72bfd9b80cce6a27356de228c3cd1530 +SIZE (libcifpp-10.0.0/PDB-REDO-libcifpp-v10.0.0_GH0.tar.gz) = 2798521 diff --git a/science/libcifpp/files/patch-CMakeLists.txt b/science/libcifpp/files/patch-CMakeLists.txt index ffc6a39a4f00..38fd02027775 100644 --- a/science/libcifpp/files/patch-CMakeLists.txt +++ b/science/libcifpp/files/patch-CMakeLists.txt @@ -1,29 +1,29 @@ ---- CMakeLists.txt.orig 2024-09-13 05:26:00 UTC +--- CMakeLists.txt.orig 2026-02-17 12:50:08 UTC +++ CMakeLists.txt -@@ -395,7 +395,7 @@ if(CIFPP_DOWNLOAD_CCD) +@@ -400,7 +400,7 @@ if(CIFPP_DOWNLOAD_CCD) - if(WIN32 OR GUNZIP STREQUAL "GUNZIP-NOTFOUND") - file( -- DOWNLOAD https://files.wwpdb.org/pub/pdb/data/monomers/components.cif -+ DOWNLOAD file://${DISTDIR_FULL}/components.cif.gz - ${COMPONENTS_CIF} - SHOW_PROGRESS - STATUS CCD_FETCH_STATUS) -@@ -403,7 +403,7 @@ if(CIFPP_DOWNLOAD_CCD) - if(NOT EXISTS "${COMPONENTS_CIF}.gz") - file( - DOWNLOAD -- https://files.wwpdb.org/pub/pdb/data/monomers/components.cif.gz -+ file://${DISTDIR_FULL}/components.cif.gz - ${COMPONENTS_CIF}.gz - SHOW_PROGRESS - STATUS CCD_FETCH_STATUS) -@@ -556,7 +556,7 @@ if(CIFPP_INSTALL_UPDATE_SCRIPT) + if(WIN32 OR GUNZIP STREQUAL "GUNZIP-NOTFOUND") + file( +- DOWNLOAD https://files.wwpdb.org/pub/pdb/data/monomers/components.cif ++ DOWNLOAD file://${DISTDIR_FULL}/components.cif.gz + ${COMPONENTS_CIF} + SHOW_PROGRESS + STATUS CCD_FETCH_STATUS) +@@ -408,7 +408,7 @@ if(CIFPP_DOWNLOAD_CCD) + if(NOT EXISTS "${COMPONENTS_CIF}.gz") + file( + DOWNLOAD +- https://files.wwpdb.org/pub/pdb/data/monomers/components.cif.gz ++ file://${DISTDIR_FULL}/components.cif.gz + ${COMPONENTS_CIF}.gz + SHOW_PROGRESS + STATUS CCD_FETCH_STATUS) +@@ -562,7 +562,7 @@ if(CIFPP_INSTALL_UPDATE_SCRIPT) - # a config file, to make it complete - # install(DIRECTORY DESTINATION "${CMAKE_INSTALL_LOCALSTATEDIR}/libcifpp") -- if(NOT EXISTS "${CMAKE_INSTALL_SYSCONFDIR}/libcifpp.conf") -+ if(TRUE OR NOT EXISTS "${CMAKE_INSTALL_SYSCONFDIR}/libcifpp.conf") - file( - WRITE ${CMAKE_CURRENT_BINARY_DIR}/libcifpp.conf - [[# Uncomment the next line to enable automatic updates + # a config file, to make it complete + # install(DIRECTORY DESTINATION "${CMAKE_INSTALL_LOCALSTATEDIR}/libcifpp") +- if(NOT EXISTS "${CMAKE_INSTALL_SYSCONFDIR}/libcifpp.conf") ++ if(TRUE OR NOT EXISTS "${CMAKE_INSTALL_SYSCONFDIR}/libcifpp.conf") + file( + WRITE ${CMAKE_CURRENT_BINARY_DIR}/libcifpp.conf + [[# Uncomment the next line to enable automatic updates diff --git a/science/libcifpp/pkg-plist b/science/libcifpp/pkg-plist index 7cc58395cd24..7a8f68736173 100644 --- a/science/libcifpp/pkg-plist +++ b/science/libcifpp/pkg-plist @@ -5,12 +5,12 @@ include/cif++/atom_type.hpp include/cif++/category.hpp include/cif++/compound.hpp include/cif++/condition.hpp +include/cif++/cql.hpp include/cif++/datablock.hpp include/cif++/dictionary_parser.hpp include/cif++/exports.hpp include/cif++/file.hpp include/cif++/format.hpp -include/cif++/forward_decl.hpp include/cif++/gzio.hpp include/cif++/item.hpp include/cif++/iterator.hpp @@ -18,10 +18,6 @@ include/cif++/matrix.hpp include/cif++/model.hpp include/cif++/parser.hpp include/cif++/pdb.hpp -include/cif++/pdb/cif2pdb.hpp -include/cif++/pdb/io.hpp -include/cif++/pdb/pdb2cif.hpp -include/cif++/pdb/tls.hpp include/cif++/point.hpp include/cif++/row.hpp include/cif++/symmetry.hpp @@ -33,8 +29,8 @@ lib/cmake/cifpp/cifpp-config.cmake lib/cmake/cifpp/cifpp-targets-%%CMAKE_BUILD_TYPE%%.cmake lib/cmake/cifpp/cifpp-targets.cmake lib/libcifpp.so -lib/libcifpp.so.7.0 -lib/libcifpp.so.7.0.8 +lib/libcifpp.so.10.0 +lib/libcifpp.so.10.0.0 %%DATADIR%%/components.cif %%DATADIR%%/mmcif_ddl.dic %%DATADIR%%/mmcif_ma.dichome | help
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