Date: Wed, 29 Oct 2014 13:33:22 +0000 From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 194683] New: parts science/py-scikit-learn (py27-scikit-learn-0.15.0_1) fail due to unresolved symbols Message-ID: <bug-194683-13@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=194683 Bug ID: 194683 Summary: parts science/py-scikit-learn (py27-scikit-learn-0.15.0_1) fail due to unresolved symbols Product: Ports Tree Version: Latest Hardware: amd64 OS: Any Status: Needs Triage Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: demon@FreeBSD.org Reporter: jacob.frelinger@gmail.com Assignee: demon@FreeBSD.org Flags: maintainer-feedback?(demon@FreeBSD.org) Parts of py27-scikit-learn-0.15.0_1 can't be used/loaded do to unresolved symbols. trying to import the PCA module from sklearn.decomposition results in: ImportError: /usr/local/lib/libcblas.so.2: Undefined symbol "cgemv_" due to it trying to import pairwise_fast.so ldd of pairwise_fast.so shows no missing libraries: [jolly@kapu metrics]$ ldd ./pairwise_fast.so ./pairwise_fast.so: libcblas.so.2 => /usr/local/lib/libcblas.so.2 (0x80162e000) libm.so.5 => /lib/libm.so.5 (0x801844000) libpython2.7.so.1 => /usr/local/lib/libpython2.7.so.1 (0x801a6c000) libc.so.7 => /lib/libc.so.7 (0x80081f000) libgfortran.so.3 => /usr/local/lib/gcc48/libgfortran.so.3 (0x801e26000) libgcc_s.so.1 => /usr/local/lib/gcc48/libgcc_s.so.1 (0x80213b000) libquadmath.so.0 => /usr/local/lib/gcc48/libquadmath.so.0 (0x802351000) libintl.so.9 => /usr/local/lib/libintl.so.9 (0x80258c000) libutil.so.9 => /lib/libutil.so.9 (0x802796000) libthr.so.3 => /lib/libthr.so.3 (0x8029a8000) running nosetests on the site-packages/sklearn directory shows several tests failing due to the same unresolved symbol (most of which are from trying to import pairwise_fast, and one from trying to import liblinear) libmap.conf is empty and no files in /usr/local/etc/libmap.conf.d --- Comment #1 from Bugzilla Automation <bugzilla@FreeBSD.org> --- Auto-assigned to maintainer demon@FreeBSD.org -- You are receiving this mail because: You are the assignee for the bug.
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