Date: Wed, 14 May 2008 14:07:01 +0000 (UTC) From: Pav Lucistnik <pav@FreeBSD.org> To: ports-committers@FreeBSD.org, cvs-ports@FreeBSD.org, cvs-all@FreeBSD.org Subject: cvs commit: ports/biology Makefile ports/biology/njplot Makefile distinfo pkg-descr ports/biology/njplot/files patch-makefile Message-ID: <200805141407.m4EE71KT003910@repoman.freebsd.org>
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pav 2008-05-14 14:07:01 UTC
FreeBSD ports repository
Modified files:
biology Makefile
Added files:
biology/njplot Makefile distinfo pkg-descr
biology/njplot/files patch-makefile
Log:
NJplot is a tree drawing program able to draw any phylogenetic tree expressed
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
package). NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building methods.
The package contains the following programs:
njplot - draw phylogenetic trees and interactively modify them
newicktops - non-interactive version rendering into a PostScript file
newicktotxt - non-interactive version rendering into a text file
unrooted - draw unrooted circular trees
If you use NJplot in a published work, please cite the following reference:
Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
biological sequence banks. Biochimie, 78, 364-369.
WWW: http://pbil.univ-lyon1.fr/software/njplot.html
PR: ports/118438
Submitted by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
Revision Changes Path
1.97 +1 -0 ports/biology/Makefile
1.1 +55 -0 ports/biology/njplot/Makefile (new)
1.1 +3 -0 ports/biology/njplot/distinfo (new)
1.1 +69 -0 ports/biology/njplot/files/patch-makefile (new)
1.1 +17 -0 ports/biology/njplot/pkg-descr (new)
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