Date: Wed, 23 Mar 2016 11:23:20 +0000 From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 207908] [NEW PORT] biology/bowtie2: Ultrafast, memory-efficient short read aligner Message-ID: <bug-207908-13-BmHM44Wek8@https.bugs.freebsd.org/bugzilla/> In-Reply-To: <bug-207908-13@https.bugs.freebsd.org/bugzilla/> References: <bug-207908-13@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D207908 --- Comment #2 from commit-hook@freebsd.org --- A commit references this bug: Author: rakuco Date: Wed Mar 23 11:22:40 UTC 2016 New revision: 411698 URL: https://svnweb.freebsd.org/changeset/ports/411698 Log: New port: biology/bowtie2. Bowtie is an ultrafast, memory-efficient short read aligner. It aligns sh= ort DNA sequences (reads) to the human genome at a rate of over 25 million 35= -bp reads per hour. This is Bowtie version 2, which will need to coexists with Bowtie 1 for t= he foreseeable future. Both are required by certain genomics pipelines, in s= ome cases (e.g. Trinity) by the same pipeline. WWW: https://github.com/BenLangmead/bowtie2 PR: 207908 Submitted by: Jason Bacon <bacon4000@gmail.com> Changes: head/biology/Makefile head/biology/bowtie2/ head/biology/bowtie2/Makefile head/biology/bowtie2/distinfo head/biology/bowtie2/files/ head/biology/bowtie2/files/patch-Makefile head/biology/bowtie2/pkg-descr head/biology/bowtie2/pkg-plist --=20 You are receiving this mail because: You are the assignee for the bug.=
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