Date: Fri, 06 Feb 2026 14:08:17 +0000 From: =?utf-8?Q?=C3=84lven?= <alven@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 0bfdf719e664 - main - biology/py-htseq: Update 2.0.9 => 2.1.2 Message-ID: <6985f5d1.36472.23c5bdc9@gitrepo.freebsd.org>
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The branch main has been updated by alven: URL: https://cgit.FreeBSD.org/ports/commit/?id=0bfdf719e6647c32614986a1a5418ee5504f1a81 commit 0bfdf719e6647c32614986a1a5418ee5504f1a81 Author: Älven <alven@FreeBSD.org> AuthorDate: 2026-02-06 13:23:15 +0000 Commit: Älven <alven@FreeBSD.org> CommitDate: 2026-02-06 14:07:11 +0000 biology/py-htseq: Update 2.0.9 => 2.1.2 Changelogs: * https://github.com/htseq/htseq/compare/release_2.0.9...release_2.1.2 * Pet portclippy(1) and portfmt(1) Approved by: db@, yuri@ (Mentors, implicit) --- biology/py-htseq/Makefile | 16 +++++++--------- biology/py-htseq/distinfo | 6 +++--- 2 files changed, 10 insertions(+), 12 deletions(-) diff --git a/biology/py-htseq/Makefile b/biology/py-htseq/Makefile index 311252464790..1b7e1d2a138b 100644 --- a/biology/py-htseq/Makefile +++ b/biology/py-htseq/Makefile @@ -1,6 +1,5 @@ PORTNAME= HTSeq -DISTVERSION= 2.0.9 -PORTREVISION= 2 +DISTVERSION= 2.1.2 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -15,18 +14,17 @@ LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= ${PYNUMPY} \ ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} -RUN_DEPENDS= ${PYNUMPY} \ - ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} \ - ${PKGNAMEPREFIX}matplotlib>=1.4.3:math/py-matplotlib@${PY_FLAVOR} -TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}scipy>1.5.0:science/py-scipy@${PY_FLAVOR} \ +RUN_DEPENDS= ${PKGNAMEPREFIX}matplotlib>=1.4.3:math/py-matplotlib@${PY_FLAVOR} \ + ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} +TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=1.4:math/py-matplotlib@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pandas>=1.1.0:math/py-pandas@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}matplotlib>=1.4:math/py-matplotlib@${PY_FLAVOR} + ${PYTHON_PKGNAMEPREFIX}scipy>1.5.0:science/py-scipy@${PY_FLAVOR} USES= python USE_PYTHON= autoplist cython distutils pytest post-stage: - ${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/HTSeq/_StepVector.cpython-${PYTHON_SUFFIX}.so - ${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/HTSeq/_HTSeq.cpython-${PYTHON_SUFFIX}.so + ${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/${PORTNAME}/*.so .include <bsd.port.mk> diff --git a/biology/py-htseq/distinfo b/biology/py-htseq/distinfo index 3afeb0581588..0356d066b903 100644 --- a/biology/py-htseq/distinfo +++ b/biology/py-htseq/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1732713260 -SHA256 (htseq-2.0.9.tar.gz) = 3bbec23f033d35f40ab33a40c2b5c43f75e382c424b804c099dea635b52c2b12 -SIZE (htseq-2.0.9.tar.gz) = 468908 +TIMESTAMP = 1770360620 +SHA256 (htseq-2.1.2.tar.gz) = 69d5a6b9a832ea85edf8a32fbac591a8af2e32bb961d1f3843c48c9d03a77a82 +SIZE (htseq-2.1.2.tar.gz) = 506243home | help
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