Date: Tue, 03 Feb 2026 05:17:46 +0000 From: Po-Chuan Hsieh <sunpoet@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 2418ca468a39 - main - devel/py-anndata: Update to 0.12.9 Message-ID: <698184fa.186ab.2a7d21f8@gitrepo.freebsd.org>
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The branch main has been updated by sunpoet: URL: https://cgit.FreeBSD.org/ports/commit/?id=2418ca468a39627add108579aa1cd306b75869ce commit 2418ca468a39627add108579aa1cd306b75869ce Author: Po-Chuan Hsieh <sunpoet@FreeBSD.org> AuthorDate: 2026-02-03 04:43:52 +0000 Commit: Po-Chuan Hsieh <sunpoet@FreeBSD.org> CommitDate: 2026-02-03 05:09:25 +0000 devel/py-anndata: Update to 0.12.9 Changes: https://github.com/scverse/anndata/tree/main/docs/release-notes https://anndata.readthedocs.io/en/latest/release-notes/ --- devel/py-anndata/Makefile | 3 ++- devel/py-anndata/distinfo | 6 +++--- devel/py-anndata/files/patch-pyproject.toml | 6 +++--- 3 files changed, 8 insertions(+), 7 deletions(-) diff --git a/devel/py-anndata/Makefile b/devel/py-anndata/Makefile index 17f1e4b072b6..ef8228f7cf1e 100644 --- a/devel/py-anndata/Makefile +++ b/devel/py-anndata/Makefile @@ -1,5 +1,5 @@ PORTNAME= anndata -PORTVERSION= 0.12.7 +PORTVERSION= 0.12.9 CATEGORIES= devel python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -21,6 +21,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}array-api-compat>=1.7.1:devel/py-array-api-c ${PYTHON_PKGNAMEPREFIX}numpy>=1.26,1:math/py-numpy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}packaging>=24.2:devel/py-packaging@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pandas>=2.1.0,1<3,1:math/py-pandas@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}pooch>=0:devel/py-pooch@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scipy>=1.11:science/py-scipy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}zarr>=2.18.4:devel/py-zarr@${PY_FLAVOR} diff --git a/devel/py-anndata/distinfo b/devel/py-anndata/distinfo index fc94296a5cea..cc6f4b8fb456 100644 --- a/devel/py-anndata/distinfo +++ b/devel/py-anndata/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1766953352 -SHA256 (anndata-0.12.7.tar.gz) = 10612d476e78570be2fdd391b09cb64d3b33cda32b1b46a0a4b999ba98d64d47 -SIZE (anndata-0.12.7.tar.gz) = 2248853 +TIMESTAMP = 1769874272 +SHA256 (anndata-0.12.9.tar.gz) = 50c89ac662d37b974dd61115b729e543cbe8c1f4358b4e4361763b8a08c724eb +SIZE (anndata-0.12.9.tar.gz) = 2253867 diff --git a/devel/py-anndata/files/patch-pyproject.toml b/devel/py-anndata/files/patch-pyproject.toml index 61ec806f6d72..e2344e7e0f56 100644 --- a/devel/py-anndata/files/patch-pyproject.toml +++ b/devel/py-anndata/files/patch-pyproject.toml @@ -1,10 +1,10 @@ --- pyproject.toml.orig 2020-02-02 00:00:00 UTC +++ pyproject.toml -@@ -39,13 +39,13 @@ dependencies = [ - "pandas >=2.1.0, !=2.1.2", +@@ -40,13 +40,13 @@ dependencies = [ + "pandas >=2.1.0, !=2.1.2, <3", "numpy>=1.26", # https://github.com/scverse/anndata/issues/1434 -- "scipy >=1.12", +- "scipy >=1.12,!=1.17.0", + "scipy >=1.11", "h5py>=3.8", "natsort",home | help
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