Date: Tue, 27 Apr 2021 08:56:24 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 73074c728a15 - main - New port: math/py-point-annotator: Annotate data with labels based on the Mann-Whitney U test Message-ID: <202104270856.13R8uOdL092580@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=73074c728a155c3e78e4a612ace088319a39b137 commit 73074c728a155c3e78e4a612ace088319a39b137 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2021-04-27 08:31:12 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2021-04-27 08:56:18 +0000 New port: math/py-point-annotator: Annotate data with labels based on the Mann-Whitney U test --- math/Makefile | 1 + math/py-point-annotator/Makefile | 23 +++++++++++++++++++++++ math/py-point-annotator/distinfo | 3 +++ math/py-point-annotator/pkg-descr | 6 ++++++ 4 files changed, 33 insertions(+) diff --git a/math/Makefile b/math/Makefile index e1040e2f2080..d3ddd859817c 100644 --- a/math/Makefile +++ b/math/Makefile @@ -832,6 +832,7 @@ SUBDIR += py-petsc4py SUBDIR += py-piranha SUBDIR += py-plastex + SUBDIR += py-point-annotator SUBDIR += py-pplpy SUBDIR += py-primme SUBDIR += py-pyFFTW diff --git a/math/py-point-annotator/Makefile b/math/py-point-annotator/Makefile new file mode 100644 index 000000000000..280b434e0539 --- /dev/null +++ b/math/py-point-annotator/Makefile @@ -0,0 +1,23 @@ +PORTNAME= point-annotator +PORTVERSION= 2.0.0 +CATEGORIES= math python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Annotate data with labels based on the Mann-Whitney U test + +LICENSE= GPLv3 +LICENSE_FILE= ${WRKSRC}/LICENSE + +BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} +RUN_DEPENDS= ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} + +USES= python:3.6+ +USE_PYTHON= autoplist distutils + +NO_ARCH= yes + +.include <bsd.port.mk> diff --git a/math/py-point-annotator/distinfo b/math/py-point-annotator/distinfo new file mode 100644 index 000000000000..00cb213d4168 --- /dev/null +++ b/math/py-point-annotator/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1619510780 +SHA256 (point-annotator-2.0.0.tar.gz) = 0bae70fc5aa67e39c230b56a7e10cea46d8fef3a52770721da3d382307fe33ef +SIZE (point-annotator-2.0.0.tar.gz) = 912918 diff --git a/math/py-point-annotator/pkg-descr b/math/py-point-annotator/pkg-descr new file mode 100644 index 000000000000..076f862f193f --- /dev/null +++ b/math/py-point-annotator/pkg-descr @@ -0,0 +1,6 @@ +The point-annotator package provides functionalities to annotate data with +labels based on the Mann-Whitney U test and Hypergeometric test. Currently, we +provide examples of the fast annotation of gene expression data with the cell +types based on marker genes. + +WWW: https://fri.uni-lj.si/en/laboratory/biolabhome | help
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