Date: Fri, 11 May 2001 11:32:55 -0500 (CDT) From: bdodson@siegfried.utmb.edu To: FreeBSD-gnats-submit@freebsd.org Subject: ports/27273: Update port by maintainer: biology/nab Message-ID: <200105111632.f4BGWt754529@histidine.utmb.edu>
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>Number: 27273 >Category: ports >Synopsis: Update port by maintainer: biology/nab >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Fri May 11 09:40:01 PDT 2001 >Closed-Date: >Last-Modified: >Originator: M. L. Dodson >Release: FreeBSD 4.3-RELEASE i386 >Organization: University of Texas Medical Branch >Environment: System: FreeBSD histidine.utmb.edu 4.3-RELEASE FreeBSD 4.3-RELEASE #0: Mon Apr 30 16:46:47 CDT 2001 bdodson@valine.utmb.edu:/usr/obj/usr/src/sys/HISTIDINE i386 >Description: Please delete the following in the files directory: patch-ad patch-ae patch-af patch-ag patch-ah patch-ai In addition, the following should be added as patch-ab: *** examples/program_7.nab.orig Thu Jan 14 16:53:07 1999 --- examples/program_7.nab Thu Jan 14 16:53:24 1999 *************** *** 9,15 **** cseq = wc_complement( "acgtacgt", "dna.amber94.rlb", "dna" ); m = wc_helix( seq, "dna.amber94.rlb", "dna", cseq, "dna.amber94.rlb", ! "dna", 2.25, -4.96, 36.0, 4.38, "" ); b = newbounds(m, ""); allocate xyz[ 4*m.natoms ]; --- 9,15 ---- cseq = wc_complement( "acgtacgt", "dna.amber94.rlb", "dna" ); m = wc_helix( seq, "dna.amber94.rlb", "dna", cseq, "dna.amber94.rlb", ! "dna", 2.25, -4.96, 36.0, 3.38, "" ); b = newbounds(m, ""); allocate xyz[ 4*m.natoms ]; >How-To-Repeat: >Fix: begin 644 nab.diff.gz M'XL("/G4^CH``VYA8BYD:69F`,P[;7/:2-*?X5?,.:X[.R"!P!A#UGLAF"2^ MC7$*>S?9JZVBA#2`-B#ID41B;Q[_]^N>T;MF)/#M5ITK<23UR_3;=/>T%--: M+HGB[:;$UA>JXUFKUHW^A2ZM#<4G\4U=490B2NW&L<FM$1`R(!UMV.L/.VW2 M:;?;]4:CD:&OW>\H&;D>T?I$ZPP[^`<QM?KKUT31FCV--+3F>9^\?ETG+\B4 M?B.NXP4^,9S-AAJ!!0O%@BT=;XC<Z\H+<J4'E!@>A7_,(8E^[J@;J$1K-T-I M9'@@D;4!F9I<%ECYT]K9)O#HYT8E'U1RY9@^R/'#PF07KWUCZZN[8+M0J;G[ M$:4Y?NM1^N;N:LBE;RTL9^.L'EMI4S2_$DW5F&`M#?^0=B<TW>]T328/+CE& MB6->QW52)Q]O9_?3T<WDLL84Q]M?)K.[Z]OI9>U,[=0;N2==>$;&H_O)N]O9 M]>3NLA:*4B<WH[O[R6Q^=WV/CY>!.VRUX+?J&Y[ENC[JTG)WBY:A^[2%2]^, MKJ?W\'<R`RXBU0%)F=[./\U^NOOYS=4UH#U2OZ[<C'Z:S"?37QJ7-03-QI?' 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MN[BBK>%T!RZZ34/\:Y%,)X-`4TS)2VR3]U"X)NRUZ$9^1/DV^IQ`;Q6CC7B+ MH,1SA.DTPT;^PAYP7+!2D4!-?T,2#?<5B(R2:==*)99CFXZ(L:U,P6`5D)*K M(62V.*3O$?V?P.Z2"<O1B0DKNDC%7(1]OV)ADKI46KZD5?+2]?R"1RH:OJ3G M8E#IFYG=BA%4,YP0JDY"]D3OE?,M0\Q%B%V:8]'$;);+!MT6A^]29OV+L.64 MO:$Y9&SDV..D953!NZ)VR#F+.7OY#Z_=R_OY,HY7=;E<ZIPGV^+MH!H9\BM" M(GW]:\(M'3QG),';\K`1!-(31Q#,CQU5_J5_BGL67L__2R92YZ6L2,U/6`HD MO9\`H.5Q3)&\LG`!LA)K`3+Q_$`RC,ISN871QM!IV<+1:7FY>V)HNB^H=JZ\ M4>1ZTFU9KF>YTLW0XGNV33$%BR]?,=ETO6D>N[B)G>*J1ZTM[>XP>MRKSLK5 MKD/1N>O8IGJ\-GTJQS#F$[!T_E1E<OZX)83UI'%"(N0+7@=L:6NC(@UC?]GR &6GL3>@`` ` end >Release-Note: >Audit-Trail: >Unformatted: To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-ports" in the body of the message
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