Date: Mon, 04 Jan 2016 11:44:24 -0500 From: "Mikhail T." <mi+thun@aldan.algebra.com> To: python@FreeBSD.org Subject: numpy would not load: libgcc_s vs. libgfortran Message-ID: <568AA168.5090400@aldan.algebra.com>
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Hi!
I built py-numpy only a few weeks ago with default config options (I
think). I'm trying to port some numpy-using software now and its
self-tests fail with the following error:
...
import numpy
File "/opt/lib/python2.7/site-packages/numpy/__init__.py", line
180, in <module>
from . import add_newdocs
File "/opt/lib/python2.7/site-packages/numpy/add_newdocs.py", line
13, in <module>
from numpy.lib import add_newdoc
File "/opt/lib/python2.7/site-packages/numpy/lib/__init__.py",
line 8, in <module>
from .type_check import *
File "/opt/lib/python2.7/site-packages/numpy/lib/type_check.py",
line 11, in <module>
import numpy.core.numeric as _nx
File "/opt/lib/python2.7/site-packages/numpy/core/__init__.py",
line 14, in <module>
from . import multiarray
*ImportError: /lib/libgcc_s.so.1: version GCC_4.6.0 required by
/opt/lib/gcc48/libgfortran.so.3 not found*
I checked all of the shared objects installed by numpy with ldd. All
report properly using the /opt/lib/gcc48/libgcc_s.so.1 (installed by the
gcc48 port) rather than the stock /lib/libgcc_s.so.1. For example:
/opt/lib/python2.7/site-packages/numpy/core/multiarray.so:
libblas.so.2 => /opt/lib/libblas.so.2 (0x801780000)
libm.so.5 => /lib/libm.so.5 (0x8019d2000)
libpython2.7.so.1 => /opt/lib/libpython2.7.so.1 (0x801bfb000)
libc.so.7 => /lib/libc.so.7 (0x800820000)
libgfortran.so.3 => /opt/lib/gcc48/libgfortran.so.3
(0x801fbc000)
* libgcc_s.so.1 => /opt/lib/gcc48/libgcc_s.so.1 (0x8022d2000)*
libquadmath.so.0 => /opt/lib/gcc48/libquadmath.so.0
(0x8024e8000)
libthr.so.3 => /lib/libthr.so.3 (0x802723000)
libintl.so.8 => /opt/lib/libintl.so.8 (0x802948000)
libutil.so.9 => /lib/libutil.so.9 (0x802b53000)
And yet, the error occurs...
Has anyone else seen this? Thanks! Yours,
-mi
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