Date: Wed, 29 May 2024 08:49:26 GMT
From: Yuri Victorovich <yuri@FreeBSD.org>
To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org
Subject: git: 72270777807c - main - science/{,py-}gemmi: update 0.6.5 =?utf-8?Q?=E2=86=92?= 0.6.6
Message-ID: <202405290849.44T8nQiq006566@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=72270777807c9d772ba812cbd5835a39f221f2ad commit 72270777807c9d772ba812cbd5835a39f221f2ad Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2024-05-29 07:49:44 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2024-05-29 08:49:15 +0000 science/{,py-}gemmi: update 0.6.5 → 0.6.6 Reported by: portscout --- science/gemmi/Makefile | 2 +- science/gemmi/distinfo | 6 +++--- science/gemmi/pkg-plist | 34 +++++++++++++++++++++++++++++----- science/py-gemmi/Makefile | 2 +- science/py-gemmi/distinfo | 6 +++--- science/py-gemmi/pkg-plist | 1 + 6 files changed, 38 insertions(+), 13 deletions(-) diff --git a/science/gemmi/Makefile b/science/gemmi/Makefile index 21e999fe3441..a52e1099ff3a 100644 --- a/science/gemmi/Makefile +++ b/science/gemmi/Makefile @@ -1,6 +1,6 @@ PORTNAME= gemmi DISTVERSIONPREFIX= v -DISTVERSION= 0.6.5 +DISTVERSION= 0.6.6 CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org diff --git a/science/gemmi/distinfo b/science/gemmi/distinfo index 79f0c73aea79..c318b2645757 100644 --- a/science/gemmi/distinfo +++ b/science/gemmi/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1708245101 -SHA256 (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 9159506a16e0d22bbeeefc4d34137099318307db1b2bebf06fb2ae501571b19c -SIZE (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 1785842 +TIMESTAMP = 1716957697 +SHA256 (project-gemmi-gemmi-v0.6.6_GH0.tar.gz) = 722369495f7374bb938d14da2c3a9f8444b753e2d9536cf097c161a53dbbae19 +SIZE (project-gemmi-gemmi-v0.6.6_GH0.tar.gz) = 1819188 diff --git a/science/gemmi/pkg-plist b/science/gemmi/pkg-plist index 758fba0338fc..c910ac13e611 100644 --- a/science/gemmi/pkg-plist +++ b/science/gemmi/pkg-plist @@ -97,7 +97,6 @@ include/gemmi/third_party/tao/pegtl/analysis/counted.hpp include/gemmi/third_party/tao/pegtl/analysis/generic.hpp include/gemmi/third_party/tao/pegtl/analysis/grammar_info.hpp include/gemmi/third_party/tao/pegtl/analysis/insert_guard.hpp -include/gemmi/third_party/tao/pegtl/analysis/insert_rules.hpp include/gemmi/third_party/tao/pegtl/analysis/rule_info.hpp include/gemmi/third_party/tao/pegtl/analysis/rule_type.hpp include/gemmi/third_party/tao/pegtl/analyze.hpp @@ -105,8 +104,19 @@ include/gemmi/third_party/tao/pegtl/apply_mode.hpp include/gemmi/third_party/tao/pegtl/argv_input.hpp include/gemmi/third_party/tao/pegtl/ascii.hpp include/gemmi/third_party/tao/pegtl/buffer_input.hpp +include/gemmi/third_party/tao/pegtl/change_action.hpp +include/gemmi/third_party/tao/pegtl/change_action_and_state.hpp +include/gemmi/third_party/tao/pegtl/change_action_and_states.hpp +include/gemmi/third_party/tao/pegtl/change_control.hpp +include/gemmi/third_party/tao/pegtl/change_state.hpp +include/gemmi/third_party/tao/pegtl/change_states.hpp include/gemmi/third_party/tao/pegtl/config.hpp include/gemmi/third_party/tao/pegtl/cstream_input.hpp +include/gemmi/third_party/tao/pegtl/disable_action.hpp +include/gemmi/third_party/tao/pegtl/discard_input.hpp +include/gemmi/third_party/tao/pegtl/discard_input_on_failure.hpp +include/gemmi/third_party/tao/pegtl/discard_input_on_success.hpp +include/gemmi/third_party/tao/pegtl/enable_action.hpp include/gemmi/third_party/tao/pegtl/eol.hpp include/gemmi/third_party/tao/pegtl/eol_pair.hpp include/gemmi/third_party/tao/pegtl/file_input.hpp @@ -115,6 +125,7 @@ include/gemmi/third_party/tao/pegtl/internal/action.hpp include/gemmi/third_party/tao/pegtl/internal/action_input.hpp include/gemmi/third_party/tao/pegtl/internal/alnum.hpp include/gemmi/third_party/tao/pegtl/internal/alpha.hpp +include/gemmi/third_party/tao/pegtl/internal/always_false.hpp include/gemmi/third_party/tao/pegtl/internal/any.hpp include/gemmi/third_party/tao/pegtl/internal/apply.hpp include/gemmi/third_party/tao/pegtl/internal/apply0.hpp @@ -123,8 +134,8 @@ include/gemmi/third_party/tao/pegtl/internal/apply_single.hpp include/gemmi/third_party/tao/pegtl/internal/at.hpp include/gemmi/third_party/tao/pegtl/internal/bof.hpp include/gemmi/third_party/tao/pegtl/internal/bol.hpp +include/gemmi/third_party/tao/pegtl/internal/bump.hpp include/gemmi/third_party/tao/pegtl/internal/bump_help.hpp -include/gemmi/third_party/tao/pegtl/internal/bump_impl.hpp include/gemmi/third_party/tao/pegtl/internal/bytes.hpp include/gemmi/third_party/tao/pegtl/internal/control.hpp include/gemmi/third_party/tao/pegtl/internal/cr_crlf_eol.hpp @@ -147,13 +158,15 @@ include/gemmi/third_party/tao/pegtl/internal/endian_win.hpp include/gemmi/third_party/tao/pegtl/internal/eof.hpp include/gemmi/third_party/tao/pegtl/internal/eol.hpp include/gemmi/third_party/tao/pegtl/internal/eolf.hpp -include/gemmi/third_party/tao/pegtl/internal/file_mapper.hpp +include/gemmi/third_party/tao/pegtl/internal/file_mapper_posix.hpp include/gemmi/third_party/tao/pegtl/internal/file_opener.hpp include/gemmi/third_party/tao/pegtl/internal/file_reader.hpp include/gemmi/third_party/tao/pegtl/internal/has_apply.hpp include/gemmi/third_party/tao/pegtl/internal/has_apply0.hpp +include/gemmi/third_party/tao/pegtl/internal/has_match.hpp include/gemmi/third_party/tao/pegtl/internal/identifier.hpp include/gemmi/third_party/tao/pegtl/internal/if_apply.hpp +include/gemmi/third_party/tao/pegtl/internal/if_missing.hpp include/gemmi/third_party/tao/pegtl/internal/if_must.hpp include/gemmi/third_party/tao/pegtl/internal/if_must_else.hpp include/gemmi/third_party/tao/pegtl/internal/if_then_else.hpp @@ -169,7 +182,6 @@ include/gemmi/third_party/tao/pegtl/internal/list_must.hpp include/gemmi/third_party/tao/pegtl/internal/list_tail.hpp include/gemmi/third_party/tao/pegtl/internal/list_tail_pad.hpp include/gemmi/third_party/tao/pegtl/internal/marker.hpp -include/gemmi/third_party/tao/pegtl/internal/minus.hpp include/gemmi/third_party/tao/pegtl/internal/must.hpp include/gemmi/third_party/tao/pegtl/internal/not_at.hpp include/gemmi/third_party/tao/pegtl/internal/one.hpp @@ -177,6 +189,10 @@ include/gemmi/third_party/tao/pegtl/internal/opt.hpp include/gemmi/third_party/tao/pegtl/internal/pad.hpp include/gemmi/third_party/tao/pegtl/internal/pad_opt.hpp include/gemmi/third_party/tao/pegtl/internal/peek_char.hpp +include/gemmi/third_party/tao/pegtl/internal/peek_mask_uint.hpp +include/gemmi/third_party/tao/pegtl/internal/peek_mask_uint8.hpp +include/gemmi/third_party/tao/pegtl/internal/peek_uint.hpp +include/gemmi/third_party/tao/pegtl/internal/peek_uint8.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf16.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf32.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf8.hpp @@ -185,13 +201,14 @@ include/gemmi/third_party/tao/pegtl/internal/plus.hpp include/gemmi/third_party/tao/pegtl/internal/raise.hpp include/gemmi/third_party/tao/pegtl/internal/range.hpp include/gemmi/third_party/tao/pegtl/internal/ranges.hpp +include/gemmi/third_party/tao/pegtl/internal/read_uint.hpp +include/gemmi/third_party/tao/pegtl/internal/rematch.hpp include/gemmi/third_party/tao/pegtl/internal/rep.hpp include/gemmi/third_party/tao/pegtl/internal/rep_min.hpp include/gemmi/third_party/tao/pegtl/internal/rep_min_max.hpp include/gemmi/third_party/tao/pegtl/internal/rep_opt.hpp include/gemmi/third_party/tao/pegtl/internal/require.hpp include/gemmi/third_party/tao/pegtl/internal/result_on_found.hpp -include/gemmi/third_party/tao/pegtl/internal/rule_conjunction.hpp include/gemmi/third_party/tao/pegtl/internal/rules.hpp include/gemmi/third_party/tao/pegtl/internal/seq.hpp include/gemmi/third_party/tao/pegtl/internal/skip_control.hpp @@ -204,6 +221,7 @@ include/gemmi/third_party/tao/pegtl/internal/trivial.hpp include/gemmi/third_party/tao/pegtl/internal/try_catch_type.hpp include/gemmi/third_party/tao/pegtl/internal/until.hpp include/gemmi/third_party/tao/pegtl/istream_input.hpp +include/gemmi/third_party/tao/pegtl/match.hpp include/gemmi/third_party/tao/pegtl/memory_input.hpp include/gemmi/third_party/tao/pegtl/mmap_input.hpp include/gemmi/third_party/tao/pegtl/normal.hpp @@ -212,10 +230,16 @@ include/gemmi/third_party/tao/pegtl/parse.hpp include/gemmi/third_party/tao/pegtl/parse_error.hpp include/gemmi/third_party/tao/pegtl/position.hpp include/gemmi/third_party/tao/pegtl/read_input.hpp +include/gemmi/third_party/tao/pegtl/require_apply.hpp +include/gemmi/third_party/tao/pegtl/require_apply0.hpp include/gemmi/third_party/tao/pegtl/rewind_mode.hpp include/gemmi/third_party/tao/pegtl/rules.hpp include/gemmi/third_party/tao/pegtl/string_input.hpp include/gemmi/third_party/tao/pegtl/tracking_mode.hpp +include/gemmi/third_party/tao/pegtl/uint16.hpp +include/gemmi/third_party/tao/pegtl/uint32.hpp +include/gemmi/third_party/tao/pegtl/uint64.hpp +include/gemmi/third_party/tao/pegtl/uint8.hpp include/gemmi/third_party/tao/pegtl/utf16.hpp include/gemmi/third_party/tao/pegtl/utf32.hpp include/gemmi/third_party/tao/pegtl/utf8.hpp diff --git a/science/py-gemmi/Makefile b/science/py-gemmi/Makefile index 0a157ec2f5ed..89b60d4aa7b1 100644 --- a/science/py-gemmi/Makefile +++ b/science/py-gemmi/Makefile @@ -1,6 +1,6 @@ PORTNAME= gemmi DISTVERSIONPREFIX= v -DISTVERSION= 0.6.5 +DISTVERSION= 0.6.6 CATEGORIES= science python PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/science/py-gemmi/distinfo b/science/py-gemmi/distinfo index 7d7f29781493..0b7ff31c6841 100644 --- a/science/py-gemmi/distinfo +++ b/science/py-gemmi/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1708246407 -SHA256 (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 9159506a16e0d22bbeeefc4d34137099318307db1b2bebf06fb2ae501571b19c -SIZE (project-gemmi-gemmi-v0.6.5_GH0.tar.gz) = 1785842 +TIMESTAMP = 1716960965 +SHA256 (project-gemmi-gemmi-v0.6.6_GH0.tar.gz) = 722369495f7374bb938d14da2c3a9f8444b753e2d9536cf097c161a53dbbae19 +SIZE (project-gemmi-gemmi-v0.6.6_GH0.tar.gz) = 1819188 diff --git a/science/py-gemmi/pkg-plist b/science/py-gemmi/pkg-plist index 9a35f7adf261..7583c7ed2cdc 100644 --- a/science/py-gemmi/pkg-plist +++ b/science/py-gemmi/pkg-plist @@ -22,4 +22,5 @@ %%PYTHON_SITELIBDIR%%/gemmi/examples/refln-stats.py %%PYTHON_SITELIBDIR%%/gemmi/examples/simple_search.py %%PYTHON_SITELIBDIR%%/gemmi/examples/sub_ccd.py +%%PYTHON_SITELIBDIR%%/gemmi/examples/to_rdkit.py %%PYTHON_SITELIBDIR%%/gemmi/examples/weight.py
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